| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2085 |
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| Symbol | |
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| ID | 4604335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2529076 |
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| End bp | 2529612 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639781470 |
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| Product | peptidoglycan-associated lipoprotein |
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| Protein accession | YP_927960 |
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| Protein GI | 119775220 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | [TIGR02802] peptidoglycan-associated lipoprotein |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000014342 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAATTGA ACAAACTGCT TAAGACCATG CTGATTGTGG CTCCTATCAT GGCTTTGTCT
GCCTGTAGCT CAACCGACTC AGCCACTGAT GCCAGCGGCT CATCCAGCAG TCTGGGTGGC
AGCGGCTCAA GCATGGGCGG CGTTGAAACC GGCAGCGTAT CCGGCATGCT GACTCCCGAA
GAGCAGATGC GCATGAAGCA GGAAGAACTG CGCCGCGAGA ACGTGATTTA CTTCGACTTC
GACCGCAGTG AAGTGTCGCC GTTGTCAGCC GATATTCTGC TGGCCCACGG TAACTATCTG
CTTGAAAACC CCTCAGTGCG TATCCTCATT GAAGGTCACT CTGACGAACG CGGTACCCCT
GAGTACAACA TTGCCCTGGG TGAGCGCCGT GCCAAGGCCG TTGCCAAGTA TCTGCAGGCC
ATGGGTGTAC AACCTGCCCA GATGAGCATT GTCAGCTACG GCGAAGAAAA GCCACAGGAT
CTGACCCGTA CCGATGAAGG TTTCTCCAAG AACCGTCGCG CAGTATTGGT GTACTGA
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| Protein sequence | MELNKLLKTM LIVAPIMALS ACSSTDSATD ASGSSSSLGG SGSSMGGVET GSVSGMLTPE
EQMRMKQEEL RRENVIYFDF DRSEVSPLSA DILLAHGNYL LENPSVRILI EGHSDERGTP
EYNIALGERR AKAVAKYLQA MGVQPAQMSI VSYGEEKPQD LTRTDEGFSK NRRAVLVY
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