| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2082 |
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| Symbol | |
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| ID | 4604332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2524637 |
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| End bp | 2525947 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639781459 |
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| Product | Signal transduction histidine kinase regulating C4-dicarboxylate transport system-like protein |
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| Protein accession | YP_927957 |
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| Protein GI | 119775217 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0339315 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTCGA TGCTATCCAC CATCATTGAA AAGGTTTCCA ATACCCGGGG TGAAGCGTTT
TTCAACAGCA TAACCCTTGC GCTGCACGAT GCCATTGGCG CTGACTTTAC CTTCGTTGCC
ATCCTGGATA AAGAAAACTA CAGCTCACAT ACGCTGGCAC TGGTGGCAGA TGGCAAGCTG
GTTGACAACA TTTCCTACTC CCTTGCCAAT ACGCCCTGCG CCAATGCCGC GGATGACTCG
GTGTGCTGTT ACCGCGCCGA TGTCACTGCC ACTTTTCCCG ATGATCTGAT GCTGCAGGAC
ATGGGAATTG AAGGCTATCT CGGCACACCG TTGCACAATC TCAAAGGTGA GGTAATGGGG
CTCATTGTCG CCCTTTATCG CCGCCCTATT GATAATCACA GCTGGGCACT GGAGCTATTC
AAACTGTTTT CCGGACGAAT AGAGGCCGAG CTTGACCGGG TAGAGCACGA AAAAAAGCTC
GAGCAGGCCA ATCAATCCCT CGAGACTAAG GTCACTGAAC GTACCGAGCA CCTGAACCGG
GTTATTGCCG ACTTAAAGCA GGCCCAGGAT AAACTTGTCG AGTCAGAAAA GATGGGAGCC
ATGGGCAGCC TGGTGGCGGG TCTTGCCCAC GAAGTGAACA CGCCGCTGGG TGTTGCAATT
ACAAGTTCCA GCGTAATTAA GGAACACAGG GACCTGCTGG TTAATGCCTA TCGCAGCGGG
GATCTGTCCA CCGAGCAGCT GGATGAGTTT CTCGATGTCT GTGATAACGC GCTGTCGTTG
TTGGATATCA ATCTCCATCG GGCCATCGAA CTGGTTGAAA GTTTTAAACG CACGGCGGCG
GATCAACACA ACAACGATAC AGAGCACATT AATCTGGCGC AGTATTACCA TCAGGTCATT
ACCGCCCTCA AACCACTGCT AAACACCATG CAGGCACAGG TGAAACTTGA AATCCCAACA
GACTGGGAGG TGGATACCGT CCCGGGGGCC CACTCACAGA TCCTCACCAA TCTGCTCAGT
AACAGCATCA GCCATGGCTT CACTCAGGGC GAGGACAACC AAATCCACAT CAGGGGCAAG
CGCCTTGCCG ATGGCAGTTA CCACATCCAC TACAGTGACA ACGGTAAAGG TCTGAACGAA
GAAGCCAGAA AACGCATTTT CGAACCCTTT TACACCACGG CGCGCGCCAA AGGCGGCATT
GGTCTTGGGA TGAGCATTGT GTTTAACCTT GTTCACCAAC AGCTCAATGG AGCCCTGAAC
TTGCCCGAGT ATGATAAAGG ATTTGCCATG GAATTCAGTT TTAAGGGATA G
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| Protein sequence | MDSMLSTIIE KVSNTRGEAF FNSITLALHD AIGADFTFVA ILDKENYSSH TLALVADGKL
VDNISYSLAN TPCANAADDS VCCYRADVTA TFPDDLMLQD MGIEGYLGTP LHNLKGEVMG
LIVALYRRPI DNHSWALELF KLFSGRIEAE LDRVEHEKKL EQANQSLETK VTERTEHLNR
VIADLKQAQD KLVESEKMGA MGSLVAGLAH EVNTPLGVAI TSSSVIKEHR DLLVNAYRSG
DLSTEQLDEF LDVCDNALSL LDINLHRAIE LVESFKRTAA DQHNNDTEHI NLAQYYHQVI
TALKPLLNTM QAQVKLEIPT DWEVDTVPGA HSQILTNLLS NSISHGFTQG EDNQIHIRGK
RLADGSYHIH YSDNGKGLNE EARKRIFEPF YTTARAKGGI GLGMSIVFNL VHQQLNGALN
LPEYDKGFAM EFSFKG
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