| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2074 |
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| Symbol | |
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| ID | 4604324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2512636 |
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| End bp | 2513697 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639781451 |
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| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
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| Protein accession | YP_927949 |
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| Protein GI | 119775209 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
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| TIGRFAM ID | [TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATTA AGACTGACGA ACTACGTACA TCCCTTCTTT GTAAAGTAAT TTCACCTTCA
CAACTGGCCG CAGAATACCC GCTGACACAG GAAGCGGCAG ACTATCTGGT TGCTCAGCGC
CGTGAGGTGG AAGCCATTCT CACCGGTCAG GATAAGCGCC TTCTGGTGAT TATCGGCCCC
TGCTCTATTC ACGATACCGA AGCCGCGCTC GAATATGCCG GACGTCTGGC CAAGTTGCAC
CATGAACTCA AAGACGATTT GTGCATCCTG ATGCGGGTGT ATTTTGAAAA GCCACGCACC
ATCGTTGGTT GGAAAGGGCT GATTTCCGAC CCGGATCTGG ACGGCAGCTT CAGTGCCAAC
AAAGGTCTTC GCCTTGCCCG TCATCTGCTT CAGCAAATTA CTGAACTGAA ACTGCCCATC
GCCACCGAGT TTTTGGATAT GGTGAACGGT CAGTACATCG CCGACCTTAT CACCTGGGGC
GCCATCGGTG CCCGCACCAC CGAAAGCCAA ATTCACCGCG AAATGGCGTC GGCGCTGTCT
TGCCCCGTGG GCTTTAAAAA CGGCACCGAC GGCAACATCA ATATCGCCGT GGACGCCGTG
CGCGCCGCCA AGGTGCCACA CATATTCTAC TCACCGGATA AAGATGGTCA TATGTCGGTT
TACCGCACCC ACGGTAACCC ATACGGCCAC ATCATTCTGC GTGGCGGCAA GAACCCCAAC
TACGCACAGG AGCATGTGCA AAAGGCCCAT GAGCAGCTCA AAGCCACCGG CATAGACACC
GGCATGGTGA TTGACTTCTC CCATGGCAAC AGCCAAAAGC AGCACAAAAA GCAGCTGGAA
GTAGCCGAAA ACGTGATGGC ACAAATTCGT GCCGGCTCCA CCGCCATTGC CGGCATCATG
GCCGAAAGCT TTATTGAAGA AGGTAATCAG GCGGTGGTCG AAGGCCAACC TCTTTGCTAC
GGCAAGTCCA TCACCGATGC CTGTTTGAGC TGGGGTGATA CTGAGCCGCT GCTGCGCAAT
CTGGCCGCCG CCGCACGGGT ACGCCGCGAG CTGAAAAAGT AA
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| Protein sequence | MTIKTDELRT SLLCKVISPS QLAAEYPLTQ EAADYLVAQR REVEAILTGQ DKRLLVIIGP
CSIHDTEAAL EYAGRLAKLH HELKDDLCIL MRVYFEKPRT IVGWKGLISD PDLDGSFSAN
KGLRLARHLL QQITELKLPI ATEFLDMVNG QYIADLITWG AIGARTTESQ IHREMASALS
CPVGFKNGTD GNINIAVDAV RAAKVPHIFY SPDKDGHMSV YRTHGNPYGH IILRGGKNPN
YAQEHVQKAH EQLKATGIDT GMVIDFSHGN SQKQHKKQLE VAENVMAQIR AGSTAIAGIM
AESFIEEGNQ AVVEGQPLCY GKSITDACLS WGDTEPLLRN LAAAARVRRE LKK
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