Gene Sama_2073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2073 
Symbol 
ID4604323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2511673 
End bp2512485 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content46% 
IMG OID639781450 
Producthypothetical protein 
Protein accessionYP_927948 
Protein GI119775208 
COG category[S] Function unknown 
COG ID[COG1806] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCGTA AAGTTTTCTA CATTTCCGAT GGAACGGCGA TCACAGCAGA AGTTTTCGGC 
CATGCAGTAC TTTCCCAATT TCCTATGGAA TTTGAAGCAA TTACCATTCC CTTTGTCGAA
ACCAATGCCA AAGCAGAAGC GGTAAAAAAG CAGATAAATG ATAGTTTTAT TACAACAGGA
GAGCGGCCTC TGGTATTTCA TTCCATCGTA AAGCCGGAGA TCAGAGATGT TATCTATTCC
AGTGAAGGAC TGGATTATGA CTTTTTGAAC ACCTTCGTTG CGCCACTTGA GCAACAATTG
GGCGTCAGTG CGGCACCTGT GCTGCACCGT ACCCATGGAA AAGCCAATCA CAGTTACGAA
GCCCGTATCG ATGCCATTAA CTTCGCCATG GAAAACGATG ACGGCCAGAC CCTAAAACAC
ATGGACAAAG CCGACATTAT CCTGCTGGGT GTATCCCGCT GCGGCAAAAC CCCGTCCAGT
CTGTACTTGT CGATGCAGTT TGGTATTAAA GCGGCCAATT ATCCTTTTAC AGAGGATGAC
ATGGACAGCT TAAAGCTGCC TGAAGCCCTC AAACGCAACA AACACAAGTT ATTCGGTCTG
ACTATCGATC CGGTACGTCT GCAGGAAATT CGCCAGAGCC GGATGGAGAA CAGCCGCTAC
TCCTCTTTGC GTCAATGTCG GATGGAAGTA AAGGAAGTGG AAATGATGTT TAAGAAGGAA
CGCATTCCTT ATATAGACAC CACCAATCAC TCGGTGGAGG AAATCGCCAC CAAAATTCTC
GACATGACAG GTATGGAACG TCACATGTTT TAA
 
Protein sequence
MARKVFYISD GTAITAEVFG HAVLSQFPME FEAITIPFVE TNAKAEAVKK QINDSFITTG 
ERPLVFHSIV KPEIRDVIYS SEGLDYDFLN TFVAPLEQQL GVSAAPVLHR THGKANHSYE
ARIDAINFAM ENDDGQTLKH MDKADIILLG VSRCGKTPSS LYLSMQFGIK AANYPFTEDD
MDSLKLPEAL KRNKHKLFGL TIDPVRLQEI RQSRMENSRY SSLRQCRMEV KEVEMMFKKE
RIPYIDTTNH SVEEIATKIL DMTGMERHMF