Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2073 |
Symbol | |
ID | 4604323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 2511673 |
End bp | 2512485 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 639781450 |
Product | hypothetical protein |
Protein accession | YP_927948 |
Protein GI | 119775208 |
COG category | [S] Function unknown |
COG ID | [COG1806] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCGTA AAGTTTTCTA CATTTCCGAT GGAACGGCGA TCACAGCAGA AGTTTTCGGC CATGCAGTAC TTTCCCAATT TCCTATGGAA TTTGAAGCAA TTACCATTCC CTTTGTCGAA ACCAATGCCA AAGCAGAAGC GGTAAAAAAG CAGATAAATG ATAGTTTTAT TACAACAGGA GAGCGGCCTC TGGTATTTCA TTCCATCGTA AAGCCGGAGA TCAGAGATGT TATCTATTCC AGTGAAGGAC TGGATTATGA CTTTTTGAAC ACCTTCGTTG CGCCACTTGA GCAACAATTG GGCGTCAGTG CGGCACCTGT GCTGCACCGT ACCCATGGAA AAGCCAATCA CAGTTACGAA GCCCGTATCG ATGCCATTAA CTTCGCCATG GAAAACGATG ACGGCCAGAC CCTAAAACAC ATGGACAAAG CCGACATTAT CCTGCTGGGT GTATCCCGCT GCGGCAAAAC CCCGTCCAGT CTGTACTTGT CGATGCAGTT TGGTATTAAA GCGGCCAATT ATCCTTTTAC AGAGGATGAC ATGGACAGCT TAAAGCTGCC TGAAGCCCTC AAACGCAACA AACACAAGTT ATTCGGTCTG ACTATCGATC CGGTACGTCT GCAGGAAATT CGCCAGAGCC GGATGGAGAA CAGCCGCTAC TCCTCTTTGC GTCAATGTCG GATGGAAGTA AAGGAAGTGG AAATGATGTT TAAGAAGGAA CGCATTCCTT ATATAGACAC CACCAATCAC TCGGTGGAGG AAATCGCCAC CAAAATTCTC GACATGACAG GTATGGAACG TCACATGTTT TAA
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Protein sequence | MARKVFYISD GTAITAEVFG HAVLSQFPME FEAITIPFVE TNAKAEAVKK QINDSFITTG ERPLVFHSIV KPEIRDVIYS SEGLDYDFLN TFVAPLEQQL GVSAAPVLHR THGKANHSYE ARIDAINFAM ENDDGQTLKH MDKADIILLG VSRCGKTPSS LYLSMQFGIK AANYPFTEDD MDSLKLPEAL KRNKHKLFGL TIDPVRLQEI RQSRMENSRY SSLRQCRMEV KEVEMMFKKE RIPYIDTTNH SVEEIATKIL DMTGMERHMF
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