| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2072 |
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| Symbol | |
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| ID | 4604322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2509179 |
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| End bp | 2511548 |
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| Gene Length | 2370 bp |
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| Protein Length | 789 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639781449 |
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| Product | phosphoenolpyruvate synthase |
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| Protein accession | YP_927947 |
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| Protein GI | 119775207 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
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| TIGRFAM ID | [TIGR01418] phosphoenolpyruvate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.908755 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGCAAT ATGTACTCTG GTATCAGGAA TTGGGCATGG GCGACGTCAA CAAAGTTGGC
GGCAAGAACG CTTCACTGGG CGAGATGATC AGTAATCTGG CCAACGCAGG TGTTCAAGTC
CCCGGTGGCT TTGCAACCAC GGCTCATGCG TTTAATGAGT TCCTGGAGCA AAGCGGAGTA
AACCAGAAGA TTTATGACAT TCTTGACACT CTGGACGTCG ATGATGTTAA CGCACTGGCG
AAAGTGGGTG CACAGATCAG ACAGTGGGTT ATCGAAACCC CCTTCCAACC CGAACTCGAA
CAGGCCATCC ACGAGGCCTA TAACAAACTC TCCGGTGAAA CCACCGAAGC CTCCTTTGCC
GTACGTTCCT CTGCCACCGC CGAAGACATG CCTGATGCCT CTTTCGCCGG TCAGCAGGAA
ACCTTCCTGA ACGTGAAGGG TTACGATGCC GTATTGGTGG CTATCAAGCA CGTATTTGCG
TCTTTGTTTA ACGACCGCGC GATTTCTTAC CGTGTGCACC AGGGTTACGA TCACCGTGGT
GTGGCCCTGT CTGCCGGTGT GCAGCGCATG GTGCGTTCTG ACAAAGCCGC CTCTGGTGTG
ATGTTTACCA TAGATACCGA ATCCGGTAAC GACGATGTGG TATTTGTGAC CTCATCTTAC
GGTCTGGGCG AAATGGTAGT ACAGGGCGCG GTTAACCCTG ACGAATTTTA CGTTCATAAG
CCAACCCTGA CTGCAGGCCA TCAGGCCGTA GTTCGCCGCA ACATCGGTTC CAAGCTTATC
CAGATGGTCT ACTCAGACGA TCTTTCACAC GGTAAGCAGG TGAAAATCGA AGATGTGTCG
GTGGAAAACC GTCGTCAGTT CTCCATTAAT GATGCCGAAG TGATGGAACT GGCCAAGCAG
GCCATCATCA TTGAGAAGCA CTATGGTCGT CCAATGGACA TCGAGTGGGC CAAAGATGGC
AACGACGGTA AACTCTATAT AGTTCAGGCC CGCCCTGAAA CCGTACGCTC ACGTGAAGAC
GTTCAGCTGA TTGAACGCTA TCACTTAAAG AGCCGTGGCG TTGTGATAAG CGAAGGCCGT
GCCATCGGTC ACAAGGTTGG CTCAGGTGTT GCCAAAGTGC TGAAGTCCAT TGAAGAAATG
GACAAAATCC AGCCAGGTGA CGTACTGGTA ACCGACATGA CCGACCCGGA TTGGGAACCT
ATCATGAAGC GCGCCAGCGC CATCGTGACC AACCGTGGTG GCCGTACCTG CCATGCTGCG
ATTATCGCCC GTGAACTGGG TGTGCCAGCT GTAGTGGGTT GTGGTGATGT GACTGACCGC
ATCCAGAACG GCCAGATGGT GACTGTATCC TGCGCCGAAG GCGACACAGG TTATATCTAC
GATGGCAAGC AGGAGTTTGA AGTGATCTCC AGCCGCGTGG ATTCCATGCC CTCATTACCA
ATGAAGATAA TGATGAATGT GGGTAACCCT GACCGCGCCT TCGACTTCGC CCGTCTGCCA
AACGAGGGTG TGGGTCTGGC CCGTCTTGAG TTCATCATCA ACCGCATGAT TGGTATTCAC
CCCAAGGCAC TTCTCGAATT CAACCAGCAG GAAGCTGCCC TGCAGGAAGA AATCAACGAA
ATGATTGCCG GTTACGACTC GCCAGTAGAG TACTACGTAG CCCGTCTGGT TGAAGGTATC
GCCACTATCG CGGCGGCCTT CCATCCGAAG AAGGTGATCG TGCGTATGTC TGACTTTAAG
TCAAACGAGT ACGCCAACCT GGTGGGCGGT GATCGCTACG AGCCAGAGGA AGAAAACCCA
ATGTTGGGCT TCCGTGGTGC CAGCCGTTAT ATCTCTGAGT CCTTCCGCGA CTGTTTCGCC
CTCGAGTGTG AAGCTATCAA GCGCGTTCGC AACGACATGG GTCTGAAGAA CGTGGAAATC
ATGATCCCCT TCGTGCGCAC CCTGGGTGAG GCCGAGCAGG TGATTGAACT CCTCAAACAG
GAAGGTCTGG AGCGTGGTAA AGACGGTCTG CGCGTTATCA TGATGTGTGA ACTGCCATCC
AACGCCCTGC TGGCCGAGCA GTTCCTGGAG CACTTCGATG GCTTCTCCAT CGGCTCTAAC
GACCTGACTC AGCTGACCCT GGGCCTGGAC CGTGACTCCG GCATCATCAG CCACCTGTTC
GACGAGCGTA ACGAAGCCGT GAAGGCACTG CTGGCCATGG CCATCAAGGC TGCCAAGGCC
AAGGGCGCTT ACGTGGGTAT CTGTGGTCAG GGTCCATCGG ATCACGCCGA CTTCGCCGCC
TGGCTGGTGG AGCAGGGCAT TGATACCGTG TCGCTGAACC CTGACACTGT GATTGATACC
TGGCTGTATC TGGCCGAGGC CCACGGTTAA
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| Protein sequence | MQQYVLWYQE LGMGDVNKVG GKNASLGEMI SNLANAGVQV PGGFATTAHA FNEFLEQSGV
NQKIYDILDT LDVDDVNALA KVGAQIRQWV IETPFQPELE QAIHEAYNKL SGETTEASFA
VRSSATAEDM PDASFAGQQE TFLNVKGYDA VLVAIKHVFA SLFNDRAISY RVHQGYDHRG
VALSAGVQRM VRSDKAASGV MFTIDTESGN DDVVFVTSSY GLGEMVVQGA VNPDEFYVHK
PTLTAGHQAV VRRNIGSKLI QMVYSDDLSH GKQVKIEDVS VENRRQFSIN DAEVMELAKQ
AIIIEKHYGR PMDIEWAKDG NDGKLYIVQA RPETVRSRED VQLIERYHLK SRGVVISEGR
AIGHKVGSGV AKVLKSIEEM DKIQPGDVLV TDMTDPDWEP IMKRASAIVT NRGGRTCHAA
IIARELGVPA VVGCGDVTDR IQNGQMVTVS CAEGDTGYIY DGKQEFEVIS SRVDSMPSLP
MKIMMNVGNP DRAFDFARLP NEGVGLARLE FIINRMIGIH PKALLEFNQQ EAALQEEINE
MIAGYDSPVE YYVARLVEGI ATIAAAFHPK KVIVRMSDFK SNEYANLVGG DRYEPEEENP
MLGFRGASRY ISESFRDCFA LECEAIKRVR NDMGLKNVEI MIPFVRTLGE AEQVIELLKQ
EGLERGKDGL RVIMMCELPS NALLAEQFLE HFDGFSIGSN DLTQLTLGLD RDSGIISHLF
DERNEAVKAL LAMAIKAAKA KGAYVGICGQ GPSDHADFAA WLVEQGIDTV SLNPDTVIDT
WLYLAEAHG
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