Gene Sama_2070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2070 
Symbol 
ID4604320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2505349 
End bp2505834 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content54% 
IMG OID639781447 
Producthypothetical protein 
Protein accessionYP_927945 
Protein GI119775205 
COG category[S] Function unknown 
COG ID[COG3816] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0755698 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAGA TACCAGATCC TAACACTCAG TCGGCCAACG CCATGAGTCA GGAAGGGCCC 
CCCGAGGCCG CCGCCTTTGC GGCCATGGAG AATATGCTGA AGCCAGCCTT TTGCAGCGAA
CAACCGCTTT TTGCTATAGA TGAAGCTGGG CGATGGCACT ATCAGGGACA GCCCCTGCCC
GATAAATTTG CCCGGCTCTT TATGGGTATC CTCAGGCCCG ATAGCGGCGG CTGGGCCCTG
GTAACACCGG CAGAGAGGGT CAAAGTGACG GTAGCCAGAA CGCCTGTGGT GATAGTGGAT
TTTGAAACAG CGGCAGACCA GTTGATCCTT ACCTGTGTGT TGGGAAGCCA GTACCGAGTC
GACAAAGCAG ATATCTCATT GATGGAAGAG GGTGTTTTGA TTTCACTTCC CAATTTGAAA
ACCGGCAGCA TGAGCCGTGC CTGCTTCTAT CGCTATGCGG AATTACTCCT GTGTGACAAA
GACTGA
 
Protein sequence
MTQIPDPNTQ SANAMSQEGP PEAAAFAAME NMLKPAFCSE QPLFAIDEAG RWHYQGQPLP 
DKFARLFMGI LRPDSGGWAL VTPAERVKVT VARTPVVIVD FETAADQLIL TCVLGSQYRV
DKADISLMEE GVLISLPNLK TGSMSRACFY RYAELLLCDK D