| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2065 |
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| Symbol | |
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| ID | 4604315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2501148 |
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| End bp | 2502266 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639781442 |
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| Product | cupin 4 |
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| Protein accession | YP_927940 |
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| Protein GI | 119775200 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2850] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.439804 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATAAGC TCAATCTCGA TATTCAGGCG TTCCTCGCCA ATGACTGGCA ACAGGCCCCA
AAAGTATTCA AAGGCGCTTT CCCTGACTTT GAAGATCCCA TTGCTGCAGA CGAGCTCGCG
GGTCTTGCCT GTGAAGAGGA AGTGTCCAGC CGCGTGGTTG TCACCAAGGG TAACGACTGG
GAAGTCATTT CCGGTCCCTT CGAAGACTAC GACCGGTTTG GTGAGACCCA TTGGCAGCTG
CTTGTGCAAG CCGTAAACCA CTGGTACCCC GAATCCCAGC CCCTGGTGGA AGCCTTCAGA
TTCTTGCCAG ACTGGCGCTT TGATGACCTG ATGGTGTCTT TCGCCACCCC GCAGGGCGGC
GTGGGACCTC ACATCGACAA CTACGATGTG TTTATCATTC AAGGCGAAGG CCAGCGCCGC
TGGACCGTGG GCCCCAAGGG CAACTACCAG CGCCGCGGTG GTGTAACGAC CTCACCCCTG
ATTGAAGACT TTGAGCCCAT TATCGATGTC GTGCTGGAAA AAGGTGATGT GCTTTATATC
CCGCCCGGCT TCCCTCATCA AGGTGAAACC CTGACTCTGG CACTCTCTTA TTCCATGGGG
TATCGCGCGC CCAGCCAGCA GGAGCTTGCA GGACAAATTG CCGATCAGTT GATGGATGAA
GACAAGGGGC ACAAGCGCTT TATCGCCGTG GATGGCGCCG CGAGCCATGG CACTGTGAGC
CTGGCAGAGC AGCAAGGCAT CATGCAGCTT ATCCGCGACC TTTGTAATGA CACCGATAAC
GTCGTTAAGG TCCTCGGTAA ACTCTTAAGT CAGAACCGCT TCGACCTGGA TATCCAGGAA
GATGAAAGCA TCGATGCCGA CGCCCTGGTT GAGGCTCTGA ATGAAGGGGC TGTGCTGATG
CGGATTGGTG GCCTTAAGGT GCTCAAAATG GAAGGCGACA GCCAGGCAAG GCTCTTTGTG
GCAGGCGAGA GTGTGATAAT TGAAGGCGCT TCGGAAGAAG AGCTGATCGA GGTATCCAAC
TCAGTCAACG TCAATGCTGA GCTGGCGCAG CTGCCACACT GGCAGGGCTT CTTTGTTCAG
ATGCTGCAAA AAGGCTATTT CTATCTCGGC GAAGACTGA
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| Protein sequence | MYKLNLDIQA FLANDWQQAP KVFKGAFPDF EDPIAADELA GLACEEEVSS RVVVTKGNDW
EVISGPFEDY DRFGETHWQL LVQAVNHWYP ESQPLVEAFR FLPDWRFDDL MVSFATPQGG
VGPHIDNYDV FIIQGEGQRR WTVGPKGNYQ RRGGVTTSPL IEDFEPIIDV VLEKGDVLYI
PPGFPHQGET LTLALSYSMG YRAPSQQELA GQIADQLMDE DKGHKRFIAV DGAASHGTVS
LAEQQGIMQL IRDLCNDTDN VVKVLGKLLS QNRFDLDIQE DESIDADALV EALNEGAVLM
RIGGLKVLKM EGDSQARLFV AGESVIIEGA SEEELIEVSN SVNVNAELAQ LPHWQGFFVQ
MLQKGYFYLG ED
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