| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2056 |
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| Symbol | |
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| ID | 4604306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2490792 |
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| End bp | 2493053 |
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| Gene Length | 2262 bp |
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| Protein Length | 753 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639781433 |
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| Product | ATP-dependent Clp protease, ATP-binding subunit ClpA |
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| Protein accession | YP_927931 |
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| Protein GI | 119775191 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.196672 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.465232 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAACA AAGATCTTGA AGTGACGTTG AATCTGGCGT TTCAGCAGGC AAGGGATGCC
CGCCATGAAT ACATGACAGT AGAGCACTTA CTGCTGGCAC TTATCGATAA TCCATCAGCC
CAGGATGCCT TGGTTGCCTG CGGCGCCAAC ATAGATAAGC TCAGGGAAGA AGTCGCCACC
TTTATTTCTC AAACCACGCC GGTCATTACC GATCCCGATG ATGATAGGGA AACCCAGCCT
ACACTCGGGT TCCAACGGGT GCTGCAACGG GCGGTGTTTC ATGTGCAGTC CTCCGGTCGC
AACGAAGTCA CAGGTGCCAA TGTCCTGGTG GCCATTTTCA GTGAGCAAGA ATCCCAAGCT
GTGTATTTAC TTCGTCGCAG CGATATTACC CGCCTCGACG TGGTCAATTA CATCTCCCAT
GGGTTTTCAA AGAGTGAAGA TGCACCTCAG GAATCTGAGC AGGAGCGCAT CGAAGATCAT
TCAGAGCAGG GCGAAGAGCA GCGCAGCATG CTGTCTCAGT TTGCGGCCAA CCTGAATTTA
TTGGCCGCAC AGGGAGTGAT TGACCCGCTT ATCGGCCGTG ACAACGAAAT CGAGCGCTCA
ATCCAAATCC TCTGCCGCCG CCGGAAAAAT AACCCCTTGC TCGTGGGTGA GGCAGGCGTT
GGGAAAACCG CTATTGCCGA AGGTTTGGCG TATCGCATCG TCAATGACGA CGTGCCCGAA
GTCATGCGTG ATGCCACCGT ATATTCACTG GATCTTGGCG CGCTGCTTGC GGGTACCAAG
TATCGTGGGG ATTTTGAAAA GCGGTTTAAG AGCCTGCTTA AAGAGCTCAC AGCAGATAAG
CACGCGATTC TCTTCATTGA TGAAATACAT ACCATTATAG GTGCGGGTGC TGCCTCCGGT
GGGGTGATGG ATGCCTCCAA CCTGCTCAAA CCGCTTCTTT CAAGTGGCAC CTTGCGCTGC
ATGGGCTCCA CTACCTTTCA GGAATACCAG AGTATTTTTG AGAAAGACCG TGCACTGGCG
CGTCGCTTCC AGAAGATAGA TATCAACGAG CCGTCGGTGG CCGAAACCAC CAAGATTTTG
ATGGGGCTCA AGAGCAAGTA CGAAGAACAC CATGGGGTAC GTTACACCCA GGCAGCCCTT
GCCTGCGCGG CAGAGCTCAG CGCCAAACAC ATTAATGACC GGCATTTGCC GGACAAGGCT
ATTGATGTGA TAGACGAAGC TGGCGCCCGC ATGGCAATGC AACCGGCCAG TAAACGCAGA
AAAACCATAG GCCAGGCGGA AATTGAGGCC ATTATCGCCA AAATCGCCCG TATTCCTGAA
AAGTCTGTGT CCACCTCAGA TAAGGACATG CTCAAGAACC TTGAGCGTAA CCTCAAGATG
GTGGTCTTTG GCCAGGACAA AGCCATTGAG AGCTTGAGTG CCGCTATCCG TTTGTCCCGC
AGCGGATTGG GCGCCGACAA CAAACCTGTG GGCAGTTTCC TCTTTGCCGG GCCAACCGGT
GTGGGTAAAA CCGAGGTCAC CAATCAGCTT GCCAAATGCT TGGGGCTAAA GCTGGTACGC
TTTGACATGT CTGAGTACAT GGAGGCGCAC ACAGTATCGC GTCTCATCGG CGCCCCTCCT
GGCTACGTGG GCTACGATCA GGGCGGTTTG CTGACCGATG CCGTGATTAA GCAGCCCCAC
TGTGTGGTGC TGCTGGATGA AATCGAAAAG GCCCATCCGG ATGTTTATAA CTTGCTGCTG
CAGGTGATGG ATCACGGTAC CCTGACCGAT AACAACGGCC GCAAGGCGGA CTTCCGCCAT
GTGACTCTGG TCATGACCAC CAACGCGGGT GTGCAGGAGA CTGTGCGTAA ATCCATTGGC
TTTAAACAGC AGGATCACAG CCACGATGCC ATGTCGGAAA TCAACCGGGT ATTCTCACCC
GAATTCCGTA ACCGTCTCGA CTCCATCATT TGGTTTAACC ACCTGGATTT AACCATTATT
GCCAAGGTGG TGGACAAGTT CCTGACCGAG TTGCAGGCGC AGCTCGATGC CAAACGGGTA
ACGCTGATGG TCAGTGATGA AGCCAGAACC CTGCTCGCAG AGAAGGGTTA CGACAAAGCT
ATGGGCGCCA GACCCATGGC CAGGGTGGTC AAAGACTTGA TTAAACGACC TCTGGCCGAT
GAAATCCTCT TTGGCGAACT TGAGCATGGC GGCATGGCGC ACGTCGATGC CAAAGACGGG
GAAATCGTGA TTTCTGCTGA GCGTTTGGAG AAGGTTACCT GA
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| Protein sequence | MLNKDLEVTL NLAFQQARDA RHEYMTVEHL LLALIDNPSA QDALVACGAN IDKLREEVAT
FISQTTPVIT DPDDDRETQP TLGFQRVLQR AVFHVQSSGR NEVTGANVLV AIFSEQESQA
VYLLRRSDIT RLDVVNYISH GFSKSEDAPQ ESEQERIEDH SEQGEEQRSM LSQFAANLNL
LAAQGVIDPL IGRDNEIERS IQILCRRRKN NPLLVGEAGV GKTAIAEGLA YRIVNDDVPE
VMRDATVYSL DLGALLAGTK YRGDFEKRFK SLLKELTADK HAILFIDEIH TIIGAGAASG
GVMDASNLLK PLLSSGTLRC MGSTTFQEYQ SIFEKDRALA RRFQKIDINE PSVAETTKIL
MGLKSKYEEH HGVRYTQAAL ACAAELSAKH INDRHLPDKA IDVIDEAGAR MAMQPASKRR
KTIGQAEIEA IIAKIARIPE KSVSTSDKDM LKNLERNLKM VVFGQDKAIE SLSAAIRLSR
SGLGADNKPV GSFLFAGPTG VGKTEVTNQL AKCLGLKLVR FDMSEYMEAH TVSRLIGAPP
GYVGYDQGGL LTDAVIKQPH CVVLLDEIEK AHPDVYNLLL QVMDHGTLTD NNGRKADFRH
VTLVMTTNAG VQETVRKSIG FKQQDHSHDA MSEINRVFSP EFRNRLDSII WFNHLDLTII
AKVVDKFLTE LQAQLDAKRV TLMVSDEART LLAEKGYDKA MGARPMARVV KDLIKRPLAD
EILFGELEHG GMAHVDAKDG EIVISAERLE KVT
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