| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2054 |
|---|
| Symbol | |
|---|
| ID | 4604304 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | + |
|---|
| Start bp | 2489681 |
|---|
| End bp | 2490394 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 639781431 |
|---|
| Product | arginyl-tRNA-protein transferase |
|---|
| Protein accession | YP_927929 |
|---|
| Protein GI | 119775189 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2935] Putative arginyl-tRNA:protein arginylyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000273717 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.355745 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGAAAGTA GTACCCACGT CAGCGTTGGG ATAAGCCAGC TATTCCAATG CAGTTACCTT
GAAGATCAAC AGGAACAGCT ACTCATTATT CAGGAGCCTT TTCTCGATCC CCTGTTGTTT
GAGCGACTAC TGCAGCTGGG TTTCAGACGC AGTGGTGATG CCATTTATAA ACCCCGTTGC
CCCAGCTGCA GTGCCTGTAT CGCTCTCAGA GTACCGGTGC GCAGTTTTCA GCCATCCAAG
CGGCAAAAGC GAACCCTCGC CAAAAATAAG GACCTGACGG TCAACTGGGT AAACGAGAGC
AGCGACGAGC ACTATGCTCT CTACGAAAAA TATATCAATC TCAGGCACTT TGACGGCCCC
ATGTTTCCGG CAAGCAGAGA GCAATACGAG CATTTTGTTC TGTGTGACTG GGCACCGCCG
GGATTTGTGG AATTACGACT TGAGGGAAAG TTACTCGCAG TGGCTGTGAC CGACGTACTG
CCAACCAGCC TGTCGGCTAT TTACAGCTTC TTTGACCCTG ACTTTGATGC CAGGTCCCTT
GGCAGTCAGC TGATATTGAC TCAGATGGCG CTTGCGGCCG ACATGGACAA AGCCTTTGTT
TATCTTGGCT ATCAAATCGA TGCCAACCGG AAGATGTGTT ACAAGAGACT CTATCGCCCC
TATCAAATCC TCACCCAGAA CGGCTGGGAG TTTCATACCA ACGCCAACCT CTGA
|
|---|
| Protein sequence | MESSTHVSVG ISQLFQCSYL EDQQEQLLII QEPFLDPLLF ERLLQLGFRR SGDAIYKPRC
PSCSACIALR VPVRSFQPSK RQKRTLAKNK DLTVNWVNES SDEHYALYEK YINLRHFDGP
MFPASREQYE HFVLCDWAPP GFVELRLEGK LLAVAVTDVL PTSLSAIYSF FDPDFDARSL
GSQLILTQMA LAADMDKAFV YLGYQIDANR KMCYKRLYRP YQILTQNGWE FHTNANL
|
|---|
| |