Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2053 |
Symbol | aat |
ID | 4604303 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 2488981 |
End bp | 2489691 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639781430 |
Product | leucyl/phenylalanyl-tRNA--protein transferase |
Protein accession | YP_927928 |
Protein GI | 119775188 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2360] Leu/Phe-tRNA-protein transferase |
TIGRFAM ID | [TIGR00667] leucyl/phenylalanyl-tRNA--protein transferase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000305112 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.371724 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACGGCC TGTCTTTTAT CGATGATGAA CAGATAAGAT TTCCTTCTCC CGAGCTCGCC TTGTCTGAGC CCAATGGGCT GCTGGCCATT GGCGGCTCCC TGCATCCCAA ACGTTTGCTG GCGGCCTACT ATGATGGCAT TTTCCCTTGG TTCAATGCCG AGGACCCTAT TCTGTGGTGG TCGCCTGACC CCCGGGCTGT CTTTCTTCCC GGTGAGCTTA AAATCAGTCG CAGTCTTAAG AAAAGCCTTA AAAAGCATCC ATGGCGCGTC ACGATCAATC ATGCCTTTGC CGATGTGATG GCCGGCTGTG CTCAGCCCCG TAAAAAACAA CGCGATACCT GGATAACCCA GGAAATTCAA CTGGCCTACC TTGAGATGCA CAGCCAAGGG CATGCTCACT CGGTAGAAGT GTGGATGAAA GACCGCCTGG TTGGTGGTCT TTACGGGCTT GCCATAGGAA AAGTCTTTTG TGGTGAGTCC ATGTTCCATC GTGAAACCGA TGCATCCAAG CTGGCGATGA TGGCGCTGCA CCAGCATTTA CTGCAGCACG ACTTTAAGCT GCTGGATGCG CAGATCATGA ATCCGCACCT CGAAAGCCTT GGCGCCCGCG AAGTCAGCCG GACAGCATTC CTCTCGCTGC TTAAACGTTA CCGGGACGAA CCCGTCGCCA AAAGCTGCTG GCTGCCCAGG GAGATGCCAA TTGGAAAGTA G
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Protein sequence | MNGLSFIDDE QIRFPSPELA LSEPNGLLAI GGSLHPKRLL AAYYDGIFPW FNAEDPILWW SPDPRAVFLP GELKISRSLK KSLKKHPWRV TINHAFADVM AGCAQPRKKQ RDTWITQEIQ LAYLEMHSQG HAHSVEVWMK DRLVGGLYGL AIGKVFCGES MFHRETDASK LAMMALHQHL LQHDFKLLDA QIMNPHLESL GAREVSRTAF LSLLKRYRDE PVAKSCWLPR EMPIGK
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