| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2049 |
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| Symbol | metG |
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| ID | 4604299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2484933 |
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| End bp | 2486960 |
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| Gene Length | 2028 bp |
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| Protein Length | 675 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639781426 |
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| Product | methionyl-tRNA synthetase |
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| Protein accession | YP_927924 |
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| Protein GI | 119775184 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[R] General function prediction only |
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| COG ID | [COG0073] EMAP domain
[COG0143] Methionyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase
[TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.145243 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.303358 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAATT CACAACGTAA AATCCTTGTC ACCAGCGCCC TTCCCTATGC CAACGGCCCA
ATCCATTTGG GGCACATGCT GGAATACATC CAGACCGATA TCTGGTCACG TTTTCAGAAA
CTGCGCGGCC ATGAGTGCCA CTATATTTGC GCCGACGATG CCCATGGCAC GCCTATCATG
CTCAAGGCAC AACAGCTGGG CATGGCTCCC GAAGAGATGA TTGCCCAGGT CAACGTTGAG
CATCAGCAGG ACTTCGCTGA CTTCAACGTG GCCTTTGACA ACTATCACAG CACCCACAGC
GACGAAAACC GCGCACTGGC GAGCGAGATT TATCTGAAAC TTCGTGATGG CGGCTACATC
AAGAGCAAGA CAATTTCTCA GCTGTTCGAC CCTGAAAAAT CGATGTTCCT GCCGGACCGC
TTCGTTAAGG GCACCTGCCC CAAGTGTAAG TCTGAAGATC AGTATGGCGA CAACTGCGAT
GCTTGCGGTG CAACCTACAG CCCAACCGAG CTGATTAACC CGCGCTCTGC CGTGAGTGGT
GCCACCCCGG TAATGAAAGA GACTGAGCAT TTCTTCTTCG ACCTGCCTGC GTTTGAAGGC
ATGCTCAAAG CATGGACCCG CTCAGGTGCA CTGCAGTCAG AAATGGCCAA CAAGCTGGAC
GAATGGTTCG AACAGGGCCT GCAACAGTGG GACATCACCC GCGATGCGCC TTACTTCGGT
TTTGAAATCC CCGATGCGCC GGGCAAGTAT TTTTACGTGT GGCTGGATGC CCCTATCGGC
TACATGGGCT CATTCAAAAA CTTCTGCGAT AAGCGCGGCG ATATCAATTT CGATGAGTTC
TGGGCCAAAG ACTCCAGCGC CGAGGTGTAT CACTTTATCG GCAAGGACAT CGTCTACTTC
CACAGCCTGT TCTGGCCAGC CATGCTGCAC GGCGCAGGTT TCCGCCAGCC AAGCAGTGTT
TACGCCCACG GCTATGTGAC CGTAAACGGC GCCAAGATGT CCAAATCCAA GGGCACCTTT
ATCAAGGCAC GTACCTATCT GGATCATCTG GATCCTGAGT ACCTGCGTTA CTACTACGCA
GCCAAACTCA GCGCCCGTAT CGACGACCTG GATTTGAACC TGGAAGACTT TGCCCAGCGG
GTGAACTCCG ACTTGGTTGG CAAACTTGTT AACCTGGCCT CCCGCACCGC TGGCTTTATC
ACCAAGCGCT TCGATGGCAA GCTTGCCGCC GTGGCCGACA AGAGCCTGAT TGACAGCTTC
CTCGCCAAGC AGGACGTGAT TGCTGAACTG TATGAAGCCC GCGAATACGG TAAAGCCATG
CGTGAAATCA TGGCGCTGGC CGACGTAGCC AACGGCTTTG TGGCCGATGC CGCTCCATGG
CAGCTGGTGA AACAGGACGA CAAGCAGGAA GAAGCCCATC AGGTATGCTC CAACGCACTG
AACCTGTTCC GTATTTTGGT CACCTACTTA AAGCCTGTAC TGCCACGCCT TGCCAAAGAC
GTGGAAGATT TCTTCAGGAT GGAGCTGACT TGGGACGGTC TTGACAGCGA TTTGAGCGGC
CATGAAATTG CCCCGTTCAA GCCAATGATG CAACGGGTTG AACTGGACAA GGTTGCCGCC
ATGGTGGAGG CCTCCAAGGA AAACCTGCAG GCGACTGCTG AACCGGTTAA AACAGGCCCA
CTGGCAGATG ACCCTATCAG TGAAACCATC AGCTACGAAG ACTTCGCTAA AATCGATTTG
CGTGTGGCGC TGATTCAAAA AGCCGAAGCC GTGCCAGAAG CCGATAAGCT GCTGAAGCTG
CAGCTGGATA TCGGCGGTGA AGTACGTCAG GTGTTTGCCG GTATCAAGTC TGCCTATAAT
CCGGAAGATC TCGAAGGCAA GCTCACTGTG ATGGTGGCTA ACCTCGCACC GCGTAAGATG
CGTTTCGGCA TGTCCGAAGG CATGGTGCTG GCCGCTGGCC CCGGTGGTAA AGACCTGTTT
GTGCTGGAGC CACACGCGGG CGCCAAACCA GGTATGCGGG TGAAGTAA
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| Protein sequence | MANSQRKILV TSALPYANGP IHLGHMLEYI QTDIWSRFQK LRGHECHYIC ADDAHGTPIM
LKAQQLGMAP EEMIAQVNVE HQQDFADFNV AFDNYHSTHS DENRALASEI YLKLRDGGYI
KSKTISQLFD PEKSMFLPDR FVKGTCPKCK SEDQYGDNCD ACGATYSPTE LINPRSAVSG
ATPVMKETEH FFFDLPAFEG MLKAWTRSGA LQSEMANKLD EWFEQGLQQW DITRDAPYFG
FEIPDAPGKY FYVWLDAPIG YMGSFKNFCD KRGDINFDEF WAKDSSAEVY HFIGKDIVYF
HSLFWPAMLH GAGFRQPSSV YAHGYVTVNG AKMSKSKGTF IKARTYLDHL DPEYLRYYYA
AKLSARIDDL DLNLEDFAQR VNSDLVGKLV NLASRTAGFI TKRFDGKLAA VADKSLIDSF
LAKQDVIAEL YEAREYGKAM REIMALADVA NGFVADAAPW QLVKQDDKQE EAHQVCSNAL
NLFRILVTYL KPVLPRLAKD VEDFFRMELT WDGLDSDLSG HEIAPFKPMM QRVELDKVAA
MVEASKENLQ ATAEPVKTGP LADDPISETI SYEDFAKIDL RVALIQKAEA VPEADKLLKL
QLDIGGEVRQ VFAGIKSAYN PEDLEGKLTV MVANLAPRKM RFGMSEGMVL AAGPGGKDLF
VLEPHAGAKP GMRVK
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