Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2047 |
Symbol | |
ID | 4604297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 2483007 |
End bp | 2483645 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639781424 |
Product | uridine kinase |
Protein accession | YP_927922 |
Protein GI | 119775182 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0572] Uridine kinase |
TIGRFAM ID | [TIGR00235] uridine kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.20095 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.647593 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTCGC AGCAATGTGT CATTATTGGT ATTGCAGGGG CCAGTGCATC GGGCAAGAGC CTTATCGCAA AAACCATATA TGAAGAGTTG TGCCGTGATT TGGGCACTGA TCAGATAGGT GTAATAGCAG AAGATGCCTA TTATCGCGAT CAGAGCCATC TGTCCATGGA AGAGCGGGTA AAAACCAATT ATGACCACCC CAAGGCCATG GACCATGAAT TGTTGGCGCA GCATCTGCGA AGCCTGAAAG AAGGTGACTC GGTGGAGATC CCGGTATACA GCTACACAGA GCATACCCGG ATGAGCGATA CCCGCACCAT GACGCCCAAG AAGGTGATTA TCCTCGAAGG CATCTTGCTG CTGACCGACC CGCATCTGCG TGATCTGATG GATGCCTCGG TATTTATGGA TACACCACTG GATATTTGTT TCCTGCGCCG TTTGACCCGT GACGTTGCTG AGCGTGGCCG TACCATGGAA TCGGTCATCA GCCAGTACCA AAAGACGGTA AGGCCGATGT TTTTGCAGTT TATTGAACCG TCCAAGCAAT ATGCCGACAT CATTGTGCCC CGTGGTGGTA AAAACCGTAT TGCCACTGAT ATCCTCAAGG CACGTATTCA GCACCTGTTG GCAAAATAA
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Protein sequence | MNSQQCVIIG IAGASASGKS LIAKTIYEEL CRDLGTDQIG VIAEDAYYRD QSHLSMEERV KTNYDHPKAM DHELLAQHLR SLKEGDSVEI PVYSYTEHTR MSDTRTMTPK KVIILEGILL LTDPHLRDLM DASVFMDTPL DICFLRRLTR DVAERGRTME SVISQYQKTV RPMFLQFIEP SKQYADIIVP RGGKNRIATD ILKARIQHLL AK
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