| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2028 |
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| Symbol | |
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| ID | 4604278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2466863 |
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| End bp | 2467735 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639781405 |
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| Product | hypothetical protein |
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| Protein accession | YP_927903 |
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| Protein GI | 119775163 |
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| COG category | [K] Transcription |
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| COG ID | [COG2378] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000322678 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.839611 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTTGG AAGAGTTGAG CCATGGTCAG CGACAGCGAC TGGCCTTTAT CGATTTCAGT
TTGCAGTATT TTGGCGAGAT CAGCCGTCAG GACCTTATCA GTCGCTTCGC CACTGGCCTT
GCTGCAGCTA CCCGCGACTT TGCGATGTAT CGCGAACTTG CCCCCGATAA TATGCAGTTG
GTGCACCAAA CCAAACGCTA TCACCGTCAA CCGGGGTTTA ATGCGCTGTT TCCCCACGAT
CCCGCAGTCA TTCTGCACGG CCTTGCCCAA GGGTTTGGTG ATGGTTTGTC CCATCCGAAA
AATCCCAGTG AAATTTGTTT CGACGCGGTG GCGCTTATTC ATCCCGAGCC GGAGATTGTC
GCTGCTGTGA TGCGAGCTAT TCAGGCCAAT GCATCGCTCA AGGTGCAGTA TGTGTCTACC
TCATCCGGTG AAACCCGCCG GGAAATAGTG CCTCATGCCA TGGTCAATAA TGGTCAGCGC
TGGCATGTGC GTGCCTATGA CAGACTCAAC CAACAATTTA CCGACTTTGT GATTAACCGG
ATTAAGTCAA TCGGCGGCTT TGGCGAGCCT GTGGTGGGGC ATGAACGCAG TGAAACCGAT
GCTCTCTGGC AGCGACAGCT TTGTCTGACG CTTATCCCTC ATCCCTCGCT TAAGTACCCC
GAAGCCATCG AGTTGGATTA CGGCATGCAA AATGGTGTAC TGGACATCAG TTGTCGTGCA
GCTCTCGCCG GTTATTTACT GCGTCAGTGG AGTGTGGATT GCAGTCCGAG GCATCAAATC
AGCTCGGGTG TGTGCCAATT GGCGCTGAAA AATCGCGAGA TTCTTCGTGA AATTGAGCAC
AGCGGCATAG TACCCGGCGC TCAAAGCCGA TAA
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| Protein sequence | MQLEELSHGQ RQRLAFIDFS LQYFGEISRQ DLISRFATGL AAATRDFAMY RELAPDNMQL
VHQTKRYHRQ PGFNALFPHD PAVILHGLAQ GFGDGLSHPK NPSEICFDAV ALIHPEPEIV
AAVMRAIQAN ASLKVQYVST SSGETRREIV PHAMVNNGQR WHVRAYDRLN QQFTDFVINR
IKSIGGFGEP VVGHERSETD ALWQRQLCLT LIPHPSLKYP EAIELDYGMQ NGVLDISCRA
ALAGYLLRQW SVDCSPRHQI SSGVCQLALK NREILREIEH SGIVPGAQSR
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