Gene Sama_2027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2027 
Symbol 
ID4604277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2466286 
End bp2466768 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content54% 
IMG OID639781404 
Productpeptidylprolyl isomerase, FKBP-type 
Protein accessionYP_927902 
Protein GI119775162 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000041603 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.755689 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATCA AAGACGATCT GGTGGTGCAG TTCAACTACA CCCTGCGTGA CGAGAAAGGC 
GAAGTAATTG AGACCAACGA AGGGCACGAC CCGATCGCTT ACCTGCACGG TCACGACAAC
ATGATGCCCG GCGTTGAAAA TGCCATCGCA GGCAAAAAGG TGGGTGATAA GTTCAGTGTG
ACACTGCCGG CCAGCGAAAC CTATGGCGAG CGTATCGAAA ATGCTGAGCA GCGTGTGCCA
TCCAAACATC TGATGGGTGC CAAGGTATGG AAACCCGGTA TGCGTGCCAT CATTAACACC
GATCAGGGTC AGCGTCAGGT GACTGTGGTT AAGGTGGGTA AGTTTATGGT TACCGTGGAT
ATCAACCACC CACTGGCAGG CCGTGAGCTG ACATTCGACA TCGAAATTGT TGACGCCCGT
GAAGCCAGCG CAGAAGAAAT TGCCCATGGT CACGCCCACG GCGTCGGTGG CCATCACCAC
TGA
 
Protein sequence
MEIKDDLVVQ FNYTLRDEKG EVIETNEGHD PIAYLHGHDN MMPGVENAIA GKKVGDKFSV 
TLPASETYGE RIENAEQRVP SKHLMGAKVW KPGMRAIINT DQGQRQVTVV KVGKFMVTVD
INHPLAGREL TFDIEIVDAR EASAEEIAHG HAHGVGGHHH