Gene Sama_2022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2022 
Symbol 
ID4604272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2458429 
End bp2459109 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content53% 
IMG OID639781399 
Productcarboxylesterase 
Protein accessionYP_927897 
Protein GI119775157 
COG category[R] General function prediction only 
COG ID[COG0400] Predicted esterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000559029 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.99764 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACAG AACAAACACC TTTGGACGCC ATAGTGGTTG AACCCGCGGT ACCTGCGCGT 
TACGCGGTAA TTTGGCTCCA TGGCCTTGGG GATTCCGGGG CTGGGTTTGC CCCCATAGTG
CCTGCGCTTT CGCTGCCAAA GGATGCCGGT ATTCGCTTTA TATTCCCCCA TGCGCCAGAA
CAGCCTGTGA CCATCAACGG TGGTTATATC ATGCGCGCCT GGTATGACAT CAAAAGTATG
GATTTGCACG ATAGGGCGGA TTTGGCGGGT GTGCTTGAAT CAGAGCACCA GATAATGGCG
CTGATTGAGG CGCAAATGGC AGCAGGTATC CCCAGTGAAC GCATCCTGTT GGCCGGATTC
AGTCAGGGTG GGGTAATGAG TCTTTTCTGT GGTTTGAGGT TTCATCAGCC CCTTGCTGGC
GTGATGGCAC TGTCATGCTA CTTGCCGGGT GCCGATACCT TGCCCGAGAA CTGCCATCCC
GCCAATGCTT CGACCCCCAT CTTGCAACAC CATGGTGAGC AGGATGAGGT GGTGCCACTC
TTTGCAGGCC AGATGGCCCA AAAGGCACTC CGTGATGCGG GTTATGACGT TGAATGGCAA
AGTTTCAACA TGGGTCATAG CGTATTACCT GCTCAGTTGA TGGAGATACG TCGCTGGTTA
TTGGCAAAAC TGGTTAATTA G
 
Protein sequence
MNTEQTPLDA IVVEPAVPAR YAVIWLHGLG DSGAGFAPIV PALSLPKDAG IRFIFPHAPE 
QPVTINGGYI MRAWYDIKSM DLHDRADLAG VLESEHQIMA LIEAQMAAGI PSERILLAGF
SQGGVMSLFC GLRFHQPLAG VMALSCYLPG ADTLPENCHP ANASTPILQH HGEQDEVVPL
FAGQMAQKAL RDAGYDVEWQ SFNMGHSVLP AQLMEIRRWL LAKLVN