| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2018 |
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| Symbol | |
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| ID | 4604268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2453387 |
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| End bp | 2455108 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639781395 |
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| Product | acetolactate synthase 3 catalytic subunit |
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| Protein accession | YP_927893 |
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| Protein GI | 119775153 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.801766 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAGC TTTCCGGCGC CAGCATGATT GTTCGATCCC TTATCGATGA AGGCGTAAAA
CACATTTTCG GTTATCCAGG TGGTTCTGTA CTGGATATCT ACGATGCCCT CCATGAAAGT
TCAAATATAG AGCACATTCT GGTTCGCCAT GAACAGGCCG CGGTACACAT GGCCGACGGC
TATGCCCGTG CCACAGGTGA TGTGGGCGTA GTACTGGTAA CCTCAGGCCC CGGCGCCACC
AACGCCATCA CAGGCATTGC CACGGCGTAT ATGGACTCGG TCCCGCTGGT TATCCTGTCC
GGCCAGGTGC CTTCCAGTCT GATTGGCAAC GATGCCTTTC AAGAATGCGA CATGATTGGC
ATCTCAAGAC CCATAGTGAA ACACTCGTTT TTGGTAAAAG ACCCCACTGA AATACCCGAA
ACCATTAAAA AAGCCTTTTA CATTGCCGCT ACCGGCCGCC CAGGCCCTGT GGTTGTGGAC
TTGCCCAAAG ACACCCTGAA CCCGGCGCTC AAGTTCGACT ATGAGTACCC GTCAGAAGTG
AAAATGCGCT CTTACAACCC CACGGTGACA GGTCATAAAG GCCAAATCCG CCGGGGTTTG
CAGGCCCTCC TCAATGCCAA AAAACCGGTA CTGTATGTGG GCGGCGGCGC TATTATCTCA
AGCTGCGACA AGCAAATTCT GGCACTGTCT GAGCGTTTGA ATATTCCAGT GGTCAACACC
CTGATGGGCC TTGGCGCCTT TCCCGGCACC CACCCCAACA ACATAGGTAT GCTGGGCATG
CATGGCACCT ATGAAGCCAA CATGACCATG CATAACAGTG ATCTGATTTT TGGTATTGGG
GTACGTTTTG ATGACCGAAC CACCAATAAC GTGCAGAAAT ACTGCCCCAA CGCCACAGTG
CTGCATATCG ATATCGACCC TTCATCCATC TCCAAGACGG TACAGGCTCA CATCCCCATC
GTAGGCAGCG CCGACAAGGT ACTGGATGAG ATGCTGTCGC TGCTGGACGG CGACACCGAA
ATGCGAAACG ATGAAGGCGC CATCGACTGC TGGTGGAATG ACATTAATCA GTGGCGTTCA
CGCAAGTGCC TGGCCTATGA GACCAACAGT GAAAAAATCA AACCGCAGCA AGTCATAGAA
ACCCTCTATC GCCTCACCAA GGGCGATGCC TATGTGAGTT CCGATGTGGG ACAGCATCAA
ATGTTTGCGG CCCTGTACTA CCCCTTTGAC AAGCCAAGAC GCTGGATAAA CTCTGGTGGT
CTGGGCACCA TGGGCTTTGG TTTGCCCGCC GCCATGGGGG TGAAGATGGC GATGCCCGAT
GAAACCGTAG TCTGTGTCAC CGGCGATGGC TCTATCCAGA TGAATATTCA AGAGCTTTCT
ACCGCACTGC AATACGATGT GCCGGTAAAA ATCATCAACC TTAACAACCG CTTCCTGGGT
ATGGTAAAGC AGTGGCAGGA CATGATTTAT TCAGGTCGCC ACTCCCACTC CTACATGGAC
TCAGTACCGG ACTTTGCCAA GATTGCCGAG GCCTATGGCC ATGTTGGCAT TACCATCAGC
CGCCCGGAGG AGCTTGAGCC CAAGCTCGCC GAAGCCCTGT CGATGACTGA CAGACTGGTG
TTTGTAGACA TTAATGTCGA TGAAACTGAG CACGTTTACC CCATGCAAAT TCGCGGGGGC
GCGATGAATG ACATGTGGCT GAGCAAAACG GAGAGAAGCT GA
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| Protein sequence | MEKLSGASMI VRSLIDEGVK HIFGYPGGSV LDIYDALHES SNIEHILVRH EQAAVHMADG
YARATGDVGV VLVTSGPGAT NAITGIATAY MDSVPLVILS GQVPSSLIGN DAFQECDMIG
ISRPIVKHSF LVKDPTEIPE TIKKAFYIAA TGRPGPVVVD LPKDTLNPAL KFDYEYPSEV
KMRSYNPTVT GHKGQIRRGL QALLNAKKPV LYVGGGAIIS SCDKQILALS ERLNIPVVNT
LMGLGAFPGT HPNNIGMLGM HGTYEANMTM HNSDLIFGIG VRFDDRTTNN VQKYCPNATV
LHIDIDPSSI SKTVQAHIPI VGSADKVLDE MLSLLDGDTE MRNDEGAIDC WWNDINQWRS
RKCLAYETNS EKIKPQQVIE TLYRLTKGDA YVSSDVGQHQ MFAALYYPFD KPRRWINSGG
LGTMGFGLPA AMGVKMAMPD ETVVCVTGDG SIQMNIQELS TALQYDVPVK IINLNNRFLG
MVKQWQDMIY SGRHSHSYMD SVPDFAKIAE AYGHVGITIS RPEELEPKLA EALSMTDRLV
FVDINVDETE HVYPMQIRGG AMNDMWLSKT ERS
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