| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2012 |
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| Symbol | |
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| ID | 4604262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2445564 |
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| End bp | 2447072 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639781389 |
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| Product | guanosine-5'-triphosphate,3'-diphosphate diphosphatase |
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| Protein accession | YP_927887 |
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| Protein GI | 119775147 |
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| COG category | [F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0248] Exopolyphosphatase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00809551 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCATCAT CAAACCAGCG ACACTTCGTT GCTATCGATA TGGGTTCGAA CAGCTTCCAT
TTGATGATTG CCCGTGAGCA AGACGGCAGT TTGCAAATTC TGCATAAAGA AAAAGCACAG
GTACAGTTGG CTCAGGGCCT GAGTCCGGAA GGCTATTTAT CCGATGAAGC CATCGGTCGG
GGCCTCGAGT GTCTGCGCAA TTTCAGTCAA CGGTTTTCAG GCTTGTGCGA AACCCAGGTG
AGACTGGTAG CAACCCACAC CCTGAGGGTC GCCCGCAATC GAGACAAATT TTTAAAAGCG
GCACTGACGG TGATCCCCTA TCCCATCGAG GTGATTTCCG GCCACGAAGA AGCGCGACTT
ATCTATTCGG GCATCGCCCA AAGCCAAGTG CTCGCCAAAC ATAACCTGAT TATCGATATC
GGCGGTGGCT CCACCGAGGT GGTGATTGGT GAAAAGAATC AGCCTGTAAT GCTCTCAAGC
CTTCGTTGTG GTTGCGTGAG CTATAACGAG CGCTTCTTTT CCGATGGTCA GCTCACCCTA
AGTGCCTTTC GCGCTGCGCA AACTGCCGCC GATAAGCAGT TTTCATCACT CTCAAAAGAC
TATTTCGATG GTCGTTGGGA CTTGGTGCTG GGCAGCTCGG GGTCAGTCAA AGCCATCTGT
GAAGCATTGC TTGAAAGTTT TGGCGATGAA ACTGTCACCC TGCCAAGGCT AAAAGAGCTG
AAACTCAAGT TGGTCCAGGC AGGTCATGTG GATGCGTTGC AATTTACCAA TATTGATAAA
AAGCGCATCA CTCTGGTGCC TGCCGGACTT GCGATTCTTA TCAGTTTTTT CCGGCGACTT
GCCATAGAAC AGCTGGAGCC CACCCCTGCG GCGCTGCGGG AAGGCGTGCT GTACGAGCTT
GCCCAAATCG ACCAGTCACA GGATATTCGT CACCGCACGG TAGAGAGCAT CGCCAACCTC
TATCATGTGG ATACCAAGCA CGGTGCCAGG GTGCGTAACA CCGCCATGGC ACTTTTTGAC
AGCGTGGCCG ACAGCTGGCA AATCCGTCCC TTTGCCCGGC TCCTGTCTTA CGCCGCTTCA
TTGCATGAAA TCGGCATTCA CATCAATTCC CGTGCTTACC ACAAGCACGG GGCCTACATC
ATCGCCAACA GTGACCTTCC CGGTTTCAGT CAGGACTTGC AGCAGGACTT GGCGATGTTA
ATCGGCAACC AGTGTAAAAA GCCGCAGTTT GATACCATCA ATGCCCTGCC CGATGGTCGC
CGTGAAGTAC TGGTAAAACT CTTGTGTTTG TTGCGTCTTG CAATCCTGGT AAATCTCGGC
CGGGTCGCCC GTTCATTGCG CCTGAGCTGC GCTGTATTGG ATACCAATGA GTTGGCGGTT
ATCCCCGAGC AAAGCGCACG GGTTGATCTG CTGCTTAAAG ATTTGAAACG AGAGAAGAAA
CATTTGGGCC AGCTTGGCCT TATTCTAAGA CTGGACAGCG AGCTTCCCTC TCCCGCTGAC
GAAGACTGA
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| Protein sequence | MSSSNQRHFV AIDMGSNSFH LMIAREQDGS LQILHKEKAQ VQLAQGLSPE GYLSDEAIGR
GLECLRNFSQ RFSGLCETQV RLVATHTLRV ARNRDKFLKA ALTVIPYPIE VISGHEEARL
IYSGIAQSQV LAKHNLIIDI GGGSTEVVIG EKNQPVMLSS LRCGCVSYNE RFFSDGQLTL
SAFRAAQTAA DKQFSSLSKD YFDGRWDLVL GSSGSVKAIC EALLESFGDE TVTLPRLKEL
KLKLVQAGHV DALQFTNIDK KRITLVPAGL AILISFFRRL AIEQLEPTPA ALREGVLYEL
AQIDQSQDIR HRTVESIANL YHVDTKHGAR VRNTAMALFD SVADSWQIRP FARLLSYAAS
LHEIGIHINS RAYHKHGAYI IANSDLPGFS QDLQQDLAML IGNQCKKPQF DTINALPDGR
REVLVKLLCL LRLAILVNLG RVARSLRLSC AVLDTNELAV IPEQSARVDL LLKDLKREKK
HLGQLGLILR LDSELPSPAD ED
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