Gene Sama_2009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2009 
Symbol 
ID4604259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2441141 
End bp2441635 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content54% 
IMG OID639781386 
ProductcreA protein 
Protein accessionYP_927884 
Protein GI119775144 
COG category[S] Function unknown 
COG ID[COG3045] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTCA GCTGGATGAA AAAAATCGCC TTATTTGGTC TTGCCATCTT GGTACTCTTG 
GGGTGTGGCG ATGATGTGGG GAAGGTGAGC CTCGGGCTTT TTACCACCAA GGATGTGGTG
ATTGACGCCA GGCAAGATCC CAAGGTGCCG GGGGTGACCT GTCATATCAG CCGGGTGGAA
GCCGATTTAT CCCTGGCTGA CCCGTCTGAC ATGTCCATAT CCTGCCGCCA GACCGGCCCC
ATTCTGGCCT CCCAGATTGC CGACATCGAC AAAAGCAAAA ACGGTGAAGT GGTGTTTTCA
AGCTCCCTCA GTGTGCTCTT TAAAACCCTG AAAGTTCGCC GTATCTATGA TGCTGGCTCG
CAAACTCTGA TGTATCTTTC CTATTCCACC AAAGAAACCT CTGGCAGCCA CAAGCACTCG
CTCTCAACCG TGCCGCTATA CGGCACCCAA GCCTGGCAGC AGGGGGAGAT GAAGCCCGTG
CCCTCGGGTA ATTAA
 
Protein sequence
MELSWMKKIA LFGLAILVLL GCGDDVGKVS LGLFTTKDVV IDARQDPKVP GVTCHISRVE 
ADLSLADPSD MSISCRQTGP ILASQIADID KSKNGEVVFS SSLSVLFKTL KVRRIYDAGS
QTLMYLSYST KETSGSHKHS LSTVPLYGTQ AWQQGEMKPV PSGN