| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2008 |
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| Symbol | |
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| ID | 4604258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2439769 |
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| End bp | 2440974 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639781385 |
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| Product | cystathionine beta-lyase |
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| Protein accession | YP_927883 |
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| Protein GI | 119775143 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.844973 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGATA AACCCATGAA AACCGCCACG AAAATCGTAA GTCTTGGCCG AGAAAAGAAA
TACAGTAAAG GGGTCATAAA TCCTCCCGTG TTTCGCGCCT CCACCATAGT GTTCGACACC
ATGGAGGAAA TGCGTCATGC CGCCAAAAAC AAACACAATG GTGAAATGTT TTATGGCCGC
CGCGGCACGC CAACGCATTT TGGTTTTCAG GCCGCCATTG CCGAGCTGGA AGGTGGTGCG
GGCACGGCGC TCTACCCCAG TGGCGCAGCG GCCATTTCAG CCAGCTTATT GGCCTTTCTC
CAGGCAGGCG ATCACCTGCT GATGGTCGAC AGCGTGTATG AGCCGACCCG GGACCTGTGT
GACAAGGTAC TCAAGGGCTA CGGTATTGAA ACCACCTACT ACGATCCCTT GATTGGTGCC
GGTATCGAGG CCTTAATCCG CCCCAACACC AGGGTGCTCT TTGTTGAGTC CCCAGGCTCT
ATCACCATGG AAGTGCAGGA TGTGCCCACC CTCGCCCGTA TCGCCCATGA ACACGGATTG
GTGGTGATAC TCGATAACAC CTGGGCTTCG CCCATCAACA GCCGTCCCTT TGAGCTTGGC
GTGGATGTCT CCATTCAGGC CGCCACAAAA TACATCGTCG GTCACTCAGA TGTGATGATG
GGAACAGCAA CCGCCAGCCC ACAATATTGG GACAAGCTGC GTGAGCACAG TTATCTCCTG
GGGCAAACAA CCTCGCCGGA TGACGTGTAC CTGGCCGCAC GGGGTCTTCG CACCCTGGGG
GTACGCATGG CACAGCACGA AAAAAATGCA CTCGCCGTGG CCAACTGGCT TAAGACCCGT
CCGGAAGTCG ACCACCTTCG CCACCCGGCT TTTGAAGAGT GCCCCGGCCA TGAGTTTTTC
AAACGGGACT TTTCTGGCAG TAATGGACTG TTTTCATTCG TATTAAAGCG AGGAACCGTG
GACGCAGTAA CTGCCATGGT CGAAGGCATG AGTCACTTTA AAATGGGCTT TTCATGGGGC
GGTTTTGAAA GCCTTATCCT CGGGGTGACA GGAATTCACA ACATCCGCTC AGCCACCCGC
TGGGACAGCA GTAAACCCCT TATTCGGGTG CACATTGGCC TGGAAGATCC GGAAGATTTG
ATTGAGGATC TCAGCGCCGG GTTTGTGCGT TTCAATGAGG TCATGGCCAA AGAAACGCAA
GGGTGA
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| Protein sequence | MSDKPMKTAT KIVSLGREKK YSKGVINPPV FRASTIVFDT MEEMRHAAKN KHNGEMFYGR
RGTPTHFGFQ AAIAELEGGA GTALYPSGAA AISASLLAFL QAGDHLLMVD SVYEPTRDLC
DKVLKGYGIE TTYYDPLIGA GIEALIRPNT RVLFVESPGS ITMEVQDVPT LARIAHEHGL
VVILDNTWAS PINSRPFELG VDVSIQAATK YIVGHSDVMM GTATASPQYW DKLREHSYLL
GQTTSPDDVY LAARGLRTLG VRMAQHEKNA LAVANWLKTR PEVDHLRHPA FEECPGHEFF
KRDFSGSNGL FSFVLKRGTV DAVTAMVEGM SHFKMGFSWG GFESLILGVT GIHNIRSATR
WDSSKPLIRV HIGLEDPEDL IEDLSAGFVR FNEVMAKETQ G
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