| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2006 |
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| Symbol | |
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| ID | 4604256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2436363 |
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| End bp | 2438522 |
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| Gene Length | 2160 bp |
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| Protein Length | 719 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639781383 |
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| Product | sensor histidine kinase |
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| Protein accession | YP_927881 |
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| Protein GI | 119775141 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.251569 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGCC TGCCATTGGG TCTTCGCGCC AAAGTCGTTA TTCTCTCACT GTTTTTGCTG
TGCCTGCCCT GGCTTGGCTA TCAATATGTG TGGGAGATGG AAAAGTACCT GCGTCACGGC
CAGGAACGTA CCCTTGAAGG CACCACTCAG GCGCTGGCGA CCGCACTGCA CGAGCGTCCG
AGGCTGTTTG ACAGTCAGGC GAGCTTTTTA TCCCAGGTCG AAAAACGTAA AGATCTCTAC
GCCCACCCGC TATCGGGTCC CATTCAGCTC GACGGAAAAC TGGATGATTG GGAACCCTAC
CGCAGCAAGG CAATGCACTA TGGTGCAGAT ATGCAGTTAA TGAGAGGCTC ACAAAGCAGC
CTCAGCTTCA ATCATATGAT TGGGCGATAC GGTAATTACC TGTACGCCTT TTTTGAAGTC
ACTGACCCGA CGCCTGTGTA TCGCGGCCGC AATAGCCTCA GGGTAGACAG AAATGATTAT
CTGGCCATCG CCACCCTCGA TGGCAGCAAT TTTTTCCACC GCTACGTGGT GGCGACACAG
AAAGATGGCT GGGTGAACGC GTTCGAGCTG CCTGCCGACC CTCAGCTCAG TTTGCCAGCG
CTGCCGGAGG TGCGTATTCA GGGGCAGTGG CACACCACGG CGCTTGGCTA CAACATCGAG
CTCAGGATCC CGCTGGAGAT GCTGGGCGGC AAAATCAGTT TCGCCCTTCA CGATGTCAAC
AACCCCAAAA ACCGTGAACT GGTGGGGATA ACGGGCACCT CCCGCACCGA CAGCCCCGAT
AATCTGGGGA CTGTACTTGT ACCTTCTCCG GAAATCGAAG CCATCATCAA AGGCATGGGG
CACAACAGCG CCCGCATCTG GGTAGTAGAC AGACATGGTC GGGTGCTGGC GCGCTCAGGG
GACATTAAAA ACAGCGACAG TATCTGGACC AAGGCCATCG GCAACGAACG TCCCGAAGGC
GCTTTTGAGC ATTGGGTTCA GGAGTATCTT TATCCACTTT ACTATCGGGT GCTCACCAAA
CCGCCTGAGG ACTTTATCGA TGGCCTTCAG GACTCCACTG AGCTCGAAGG CAGCCATATT
CAAAGGGCAC TTTCCGGCAA GCCCGGCAGC ACCTGGCGCC TGACCCCGGA CAACAAGGCC
GTGGTCCTTG CGGCGGCCAG CCCCATTTGG ATTGATGACA AGGTTATGGG CGCCGTGGTG
GCCGAAGAAA CCACCCATGG GATCCGCACC TTAAGAAACC GTGCGCTGGA AAAACTCTTC
AATGTGATCC TGACCATCAT GAGCATGGGT ACGCTGGCAC TGTTTTTCTT TGCCTCCAAT
ATCTCCAGCC GTATCCGTAA TCTCAGGGAT CAGGCCGAGA GCGCCATTGA TGCACAGGGT
CGGGTGAAGG CCAGCATCAG TCCGTCACAG TCGCTGGATG AAATTGGCGA CTTGTCGCGT
TCACTGGCAG GCATGGTGCA ACGTCTGTCC CAGTACACCC ATTATCTGGA AAATATGTCG
TCCCGATTGG GCCACGAACT GAGAACCCCG GTGGCCGTGG TGCGCTCAAG CCTGGAGCAT
CTTTCAATGC TGAGTCTTGG GGATGACAGA CAAAAGTACG TCGACCGCGC CCAGGAAGGC
GTGAGTCGCC TGAGTCTCAT TCTCGCCAAC ATGAGCGAAG CCACCCGTTT GGAAGAGTCG
CTGTCTCAAT CCGACAAGGT ACGTTTTGAT GCCAAGGCGG TGATAAAGGG CTGTGTTCAG
GGTTACCAAA TTACCTACCC AGGCGTTGCG TTAGCGCTGA CAGTGGATGA GGGAGACTAC
CCGCTGCGAG GTGTGCCCGA GTACCTGGCG CAGCTTATGG ATAAGCTGAT AAGCAATGCA
CTGGAATTTA TGACACCGGG TACACCCATC AATATCAGTC TCAGTCACAG TCATAAAAAG
CTGAAACTTT GCGTCACTAA TCAGGGGCCA TTGTTGCCTG AGGACATGGC AGAGCGCATC
TTCGACTCCA TGGTCACTGT GAGGCCTCCG GGGCAGGATA ATAAACCGCA CCTTGGATTG
GGTTTGTATA TTGCAAGACT GATTGCCGGA TTTCACGGCG GCGATATCAA AGCGGAAAAT
CTCGCCGGTA ACGACGGTGT CCGTATATCC GTCTCAATGC CGCTCGAGTC TGCACTTTGA
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| Protein sequence | MIRLPLGLRA KVVILSLFLL CLPWLGYQYV WEMEKYLRHG QERTLEGTTQ ALATALHERP
RLFDSQASFL SQVEKRKDLY AHPLSGPIQL DGKLDDWEPY RSKAMHYGAD MQLMRGSQSS
LSFNHMIGRY GNYLYAFFEV TDPTPVYRGR NSLRVDRNDY LAIATLDGSN FFHRYVVATQ
KDGWVNAFEL PADPQLSLPA LPEVRIQGQW HTTALGYNIE LRIPLEMLGG KISFALHDVN
NPKNRELVGI TGTSRTDSPD NLGTVLVPSP EIEAIIKGMG HNSARIWVVD RHGRVLARSG
DIKNSDSIWT KAIGNERPEG AFEHWVQEYL YPLYYRVLTK PPEDFIDGLQ DSTELEGSHI
QRALSGKPGS TWRLTPDNKA VVLAAASPIW IDDKVMGAVV AEETTHGIRT LRNRALEKLF
NVILTIMSMG TLALFFFASN ISSRIRNLRD QAESAIDAQG RVKASISPSQ SLDEIGDLSR
SLAGMVQRLS QYTHYLENMS SRLGHELRTP VAVVRSSLEH LSMLSLGDDR QKYVDRAQEG
VSRLSLILAN MSEATRLEES LSQSDKVRFD AKAVIKGCVQ GYQITYPGVA LALTVDEGDY
PLRGVPEYLA QLMDKLISNA LEFMTPGTPI NISLSHSHKK LKLCVTNQGP LLPEDMAERI
FDSMVTVRPP GQDNKPHLGL GLYIARLIAG FHGGDIKAEN LAGNDGVRIS VSMPLESAL
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