| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2005 |
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| Symbol | |
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| ID | 4604255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2435671 |
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| End bp | 2436366 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639781382 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_927880 |
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| Protein GI | 119775140 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.243352 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.209106 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACGAA TTGCCATCGT CGAAGATGAA GCCGCCATCC GCGAAAACTA CAAAGATGTG
CTCCAGTCCC ATGGATATCT GGTGCAAACC TTTGCCAATC GTCCCGATGC CATGCTGGCG
TTTCAAACCC GGCTGCCGGA TTTGGCCATT ATAGATATTG GTCTTGGGGA CGAAATCGAT
GGCGGTTTTA CCCTGTGTCA GGGACTCAGA GCCCTGTCGC CCACCATTCC CATCATCTTT
TTGACCGCCC GCGACAGTGA CTTTGATACC GTCACAGGCC TTCGGCTGGG GGCGGACGAC
TATTTGTCCA AAGAAGTGAG TTTTCCACAT CTGCTGGCTA GGCTGGCCGC GCTGTTTCGC
CGCTGTGAAC AGCTTAAAGC GCCGGCTACA CCGGATAATC TGCTTACCCG TGGGCACCTG
ACCATAGATG CCAATCGCAT TCAGGTGTAC TGGCGCGATT TGCCGATTGA ACTGACGGTG
ACCGAATTTT GGATGGTGCA TGCTCTTGCC CGCCACCCGG GCCATGTGAA GAGCCGCACC
GAACTGATGC AGGAAGCGAA AATCTACGTC GATGACAGCA CCATCACCAG CCATGTAAAG
CGCATTCGCA AAAAATTCAT CGCGGCCGAC ACCGAGTTTG ATTGCATCGA CACCGTCTAT
GGCATGGGCT ATCGATGGGA CAGCCAGAGT TCATGA
|
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| Protein sequence | MKRIAIVEDE AAIRENYKDV LQSHGYLVQT FANRPDAMLA FQTRLPDLAI IDIGLGDEID
GGFTLCQGLR ALSPTIPIIF LTARDSDFDT VTGLRLGADD YLSKEVSFPH LLARLAALFR
RCEQLKAPAT PDNLLTRGHL TIDANRIQVY WRDLPIELTV TEFWMVHALA RHPGHVKSRT
ELMQEAKIYV DDSTITSHVK RIRKKFIAAD TEFDCIDTVY GMGYRWDSQS S
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