| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2004 |
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| Symbol | |
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| ID | 4604254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2434710 |
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| End bp | 2435432 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639781381 |
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| Product | OmpA family protein |
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| Protein accession | YP_927879 |
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| Protein GI | 119775139 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.200966 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCC AATTACTCGC TTCTGTTATT TCTCTGGCTC TGATTGCACC TGCGGCCAAT
GCCGCTGAGC GCGACCATAA CGAAGAACTG GTCGGTTTGG GCTCAGGTGC CCTGATTGGT
GCCGCCGTGG GGGGACCCGT AGGTGCCATC ATAGGCGCCT TTGCCGGCGG CATTATCGGA
AAATCCGTCG GTGATGAGGA AGAGATTAAC GATCATAAGC AGGCACTCGC CACACAGGAT
GCCGAAATTG AACGCCTTGC TCAAAAAAGC GCCAACTATG ATGCACTTGC CAGTGACTAT
GCCATAACCC GCGCCCAGCT GAATACCCTG CAAACAGCCC GGGAGGCCAA GCTGACCGAG
CTTACGCTCG GGCTTAACGT GCAGTTCAAA ACCGGATCGT CGGACATTGA ACCCCACTTT
CAAAACCAAC TGCAGGCTGT GGCCCGCGTG ATGGAGGCCC AGCCAGATCT GGTTATTGAT
TTGAAAGGCT TTGCCGACCG CAGGGGAGAC AGTGACTACA ACCAGGCCCT GTCTGAGCAG
CGCCTCGCCA ATGTGAAAGC CTATCTCGTC AGTGCCGGTG TGGCATCAGA CCGGCTCCAG
GGAAAGGCCT TTGGCGCCAC AGCGCCGCTC AGTGCCGATG CGGGCTTTGA AAGTGACTTT
TTTGACCGTC GTGTGACTCT GGAGCTGGTT CCTGCGGATA CCAGCATGGC GGCAACGCAC
TGA
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| Protein sequence | MKTQLLASVI SLALIAPAAN AAERDHNEEL VGLGSGALIG AAVGGPVGAI IGAFAGGIIG
KSVGDEEEIN DHKQALATQD AEIERLAQKS ANYDALASDY AITRAQLNTL QTAREAKLTE
LTLGLNVQFK TGSSDIEPHF QNQLQAVARV MEAQPDLVID LKGFADRRGD SDYNQALSEQ
RLANVKAYLV SAGVASDRLQ GKAFGATAPL SADAGFESDF FDRRVTLELV PADTSMAATH
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