Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2000 |
Symbol | |
ID | 4604250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 2429593 |
End bp | 2430453 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639781377 |
Product | hypothetical protein |
Protein accession | YP_927875 |
Protein GI | 119775135 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000240648 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.359463 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGGCAA CTTCGACCCT GTTGTTAATG GCATTGGCAG GATTTAGCCA GTGCGCGCTC GCCAAGGATA TGACCCTTCG GGTCGGTGGA TTTTACTCTC AGTCTGATTC CAGCATAGAC GTAACCGATC CTGTGATTGG TGAAGACTTT CGGCTGGATT TCGAGAGCGA CCTCCAGCTC GCCGAAAACC AGTTCCTGCC CTTTATCGAA TTTGAATACG CCTTTGGCGA CAGACACAAT TTCTACCTGG ATTGGAAACG TCTGCATCGC AGCGCCGAAA CCAACGCCGT CACCCGCCCA TTTGATGTAC AAATCGACGA TACAGTCTAT TCCGTAAAGG CCGGTGGCCA ACTCAATACC ACACTGAATA TTGATGTGCT GCGTCTTGGC TATGGTTACG ACCTGCTACA AGGTGACAAT TACAGCCTGG GCATTACCCT GGGATTACAC ACCATGTTCA TCGAGTCGGT GTTTGAGGGT GCAATTGGCG CCTGTCTTGC CACCGAGCTG GATGGCGATC TGTGCAGCCA GCGCCCTATT CCGAGGATTG TGGAAAACAG CGTCACTGCC CCTCTGCCGG ATATTGGCCT CATTGGTCAT TACGAGTTTT TGCCCGGCTG GCGCTTCTCG GCCCATGGTC AGTACTTCGC CATCAAACTC GATGATTTGG ATGGCTCACT GACTGACATC CGCGCCGGTG TCAGTGCCGA CCTCGGCGAG AGCTGGAGCC TGTCACTGGC GTACAATTAT TACAAAGTCG ATGTGGATGT GACCCAGTCT GCTGAAAACA TCAAAGTGGC CGATTACAAC ATCTTCTACA AGTTTGTTGG CCCAATGATT TCGGTCAGTT ATCGCTTTTA A
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Protein sequence | MRATSTLLLM ALAGFSQCAL AKDMTLRVGG FYSQSDSSID VTDPVIGEDF RLDFESDLQL AENQFLPFIE FEYAFGDRHN FYLDWKRLHR SAETNAVTRP FDVQIDDTVY SVKAGGQLNT TLNIDVLRLG YGYDLLQGDN YSLGITLGLH TMFIESVFEG AIGACLATEL DGDLCSQRPI PRIVENSVTA PLPDIGLIGH YEFLPGWRFS AHGQYFAIKL DDLDGSLTDI RAGVSADLGE SWSLSLAYNY YKVDVDVTQS AENIKVADYN IFYKFVGPMI SVSYRF
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