| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1991 |
|---|
| Symbol | |
|---|
| ID | 4604241 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | - |
|---|
| Start bp | 2421680 |
|---|
| End bp | 2422609 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 639781368 |
|---|
| Product | bifunctional methionine sulfoxide reductase B/A protein |
|---|
| Protein accession | YP_927866 |
|---|
| Protein GI | 119775126 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0225] Peptide methionine sulfoxide reductase
[COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase |
|---|
| TIGRFAM ID | [TIGR00357] methionine-R-sulfoxide reductase
[TIGR00401] methionine-S-sulfoxide reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.145028 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAACGC TGAACGAATT TGAACGTTAT GTAATCGAAG AGAAGGGGAC AGAGCGCCCT
TTCAGTGGTG AGTATTATCT GCATAATGCC CAGGGCGTTT ACTGTTGCAG GAAATGCGAT
GCGCCGCTGT ATTTATCAGA GCACAAGTTC CACGCCCATT GTGGCTGGCC TGCCTTTGAT
GATGAAATTC CTGGCGCTGT GGCAAGGCAT ACGGATGCAG ACGGTCACAG GGTGGAAATC
GTCTGCGCAT CCTGTGGCGG TCATTTGGGG CATGTATTTG AGGGTGAGTA TCTTACTGAG
AAAAACCTGA GGCACTGCGT CAACTCGGTG TCCATGGTGT TTAAGAGCCA TGAAGAGATG
GAACAGGGAC AGAAAACTAT AAGCGAGGCC GGCCCAACTG CCAATGCCTT TGCCACCTTT
GGCGCCGGTT GTTTTTGGTG TGTTGAAGCG ATTTTTTTAG CATTGAAAGG GGTGGTCAGC
GTCAAACCAG GCTACGCTGG TGGCCCTGCA GCCGATGCCA ATTACAAAAG AGTGTGCGAC
GGTGATACAG GTCATGCGGA AGTCGTTCAT ATCGAGTACA AGCCGGACGA GGTAAGCTTT
GAGACTCTGA TCGAGGTGTT CTTTCAAAGC CACGACCCCA CCACCCTTAA CCGCCAGGGT
AACGATGTGG GAACCCAGTA TCGTTCGGTG ATATTTGCAC ATAATGAACC GCAGGCCGAG
GCCGCAGCAA AGGCGATAGA AGCCTTGACC AAGTCGGGCG CTTTCGATAA CCCCATAGTG
ACCGAAGTGG TGGCTTTCGA TGAGTTTTAT CCCGCGGAAG ACTATCACCA TGACTATTTT
GCCCGTAACG GCGAGCAGAG GTACTGTGCC CTGGTGGTAA AACCCAAAGT CGACAAGTTT
AAAAAGGCCT TTGCATCACT GCTGAAATAG
|
|---|
| Protein sequence | MRTLNEFERY VIEEKGTERP FSGEYYLHNA QGVYCCRKCD APLYLSEHKF HAHCGWPAFD
DEIPGAVARH TDADGHRVEI VCASCGGHLG HVFEGEYLTE KNLRHCVNSV SMVFKSHEEM
EQGQKTISEA GPTANAFATF GAGCFWCVEA IFLALKGVVS VKPGYAGGPA ADANYKRVCD
GDTGHAEVVH IEYKPDEVSF ETLIEVFFQS HDPTTLNRQG NDVGTQYRSV IFAHNEPQAE
AAAKAIEALT KSGAFDNPIV TEVVAFDEFY PAEDYHHDYF ARNGEQRYCA LVVKPKVDKF
KKAFASLLK
|
|---|
| |