Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1985 |
Symbol | |
ID | 4604235 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 2412535 |
End bp | 2413059 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639781362 |
Product | hypothetical protein |
Protein accession | YP_927860 |
Protein GI | 119775120 |
COG category | [R] General function prediction only |
COG ID | [COG1399] Predicted metal-binding, possibly nucleic acid-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000046877 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000655562 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCAAACAG TAAAGATACC GGTTTCTATC GATCCGATCC GCGCCGCGTC AAATCGCCTG AGTTATCAGG GGATTGTGCC AGGCAAGGTG TTAAAACGAT TGAGAGAATT GACAGCCGGC GACTGTTCCG ATGTGACAGT GTCGTTGGAA TGTGGTGTTG ATTTACAGGG GATAGTCTAC CTGAAAGGGA CGGCTGTGAC GGAGCTCACT CTGTTATGTC AACGTTGCAT GGCACTTTAT ACCACTGAGG TTACGGTCGA CTTTTGCTTC AGTCCTTGCA GGACAGAGGC GGAAATCGAT GAGCTCCCGG ATGCGTATGA CCCTATTGAG TGCGATGAAA TTGGCGAGAT ACGTCTGCAG CAACTGGTCG AAGACGAGTT GATTTTGGCA ATGCCTTTGA TCCCGGCGCA TCAAAATATT GATTGCAACC TGGGTTCCCA GGACATAGTC GTAGGCGAGA TTGAAGCCGC TCAAGAGGAG CGTCCAAATC CGTTTGCAGT GTTAGAAAAA CTGAAGAGCA AGTAA
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Protein sequence | MQTVKIPVSI DPIRAASNRL SYQGIVPGKV LKRLRELTAG DCSDVTVSLE CGVDLQGIVY LKGTAVTELT LLCQRCMALY TTEVTVDFCF SPCRTEAEID ELPDAYDPIE CDEIGEIRLQ QLVEDELILA MPLIPAHQNI DCNLGSQDIV VGEIEAAQEE RPNPFAVLEK LKSK
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