| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1983 |
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| Symbol | |
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| ID | 4604233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2411305 |
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| End bp | 2412333 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639781360 |
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| Product | putative glycerol-3-phosphate acyltransferase PlsX |
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| Protein accession | YP_927858 |
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| Protein GI | 119775118 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0416] Fatty acid/phospholipid biosynthesis enzyme |
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| TIGRFAM ID | [TIGR00182] fatty acid/phospholipid synthesis protein PlsX |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000578397 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000727817 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACGAATC TGACGCTTGC GTTAGATGCG ATGGGGGGCG ATCACGGCCC CCAAGTCACG
GTGCCTGCGG CTTTGCAGGC ACTTCGACTA CACCCTAAGC TCTCCCTCCT GCTCGTCGGT
GACGAGACTC AAATATCCCC GTATCTTTCT TCTGCTGAGA TAGACGTTCG CAGCAGGATA
ACCCTTGTGC ATACCACCGA AGTGGTGCGT ATGGACGATA AGCCCGCAAC TGCGCTCAGA
CATGCAAAAA ACAGCTCCAT GCGACTGGCC ATAGAACAGG TTCGTGATGG CATGGCTGAT
GGCTGTGTCA GTGCCGGTAA CACTGGCGCG CTGATGGCGA TGGCCAAGGT ACTGCTTAAA
ATGTTGCCCG GTGTCGACAG GCCCGCGTTG GTCAGTTGCT TGCCGGCTAT CAATGGTAAA
CCCGTTTATT TGCTCGATCT TGGTGCCAAC ATTCAGTGCG ACTACGATAC CTTGTTCCAA
TTTGCGGTGA TGGGCTCAGT GCTCAGTGAA GCGGTCGATA AGATTGCCCG CCCCAAGGTC
GCGCTTCTGA ATGTGGGCAT TGAAGAATGC AAGGGCAATG GCGATGTGCA GCAGGCTGCA
CAATTACTGC TTCATACTCC CCAGCTCAAC TATGCCGGCT TTATTGAAGG CGATGAAATC
TACAGTGGAA AAGTGGATGT CATCGTTTGT GACGGCTTTG TGGGCAACAT CACACTCAAA
ACCTCAGAAG GCATTGCCAG ACTGCTGGTT CATCAATTAA AACAAGGCCT GGCCAAAGGC
TTTGTGGTTC GAATACTTGC GCGTTTGCTC GCGCCCCGCA TTCAGAAAGT ACTCAACCAG
ATGAACCCCG ACCACTATAA CGGAGCAAGT CTGTTAGGAT TGCGCGCAGT AGTAGTGAAA
AGCCACGGTA ATGCAGACGA ACACGCCTAT ATACAAGCAA TTAGTCTTGC CTACACCGAG
GCAAAACGTC GACTTCCAGA GATGATCAAA GATCGTCTTG AGTCGATTCT TTTAGATATC
AATAGCTGA
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| Protein sequence | MTNLTLALDA MGGDHGPQVT VPAALQALRL HPKLSLLLVG DETQISPYLS SAEIDVRSRI
TLVHTTEVVR MDDKPATALR HAKNSSMRLA IEQVRDGMAD GCVSAGNTGA LMAMAKVLLK
MLPGVDRPAL VSCLPAINGK PVYLLDLGAN IQCDYDTLFQ FAVMGSVLSE AVDKIARPKV
ALLNVGIEEC KGNGDVQQAA QLLLHTPQLN YAGFIEGDEI YSGKVDVIVC DGFVGNITLK
TSEGIARLLV HQLKQGLAKG FVVRILARLL APRIQKVLNQ MNPDHYNGAS LLGLRAVVVK
SHGNADEHAY IQAISLAYTE AKRRLPEMIK DRLESILLDI NS
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