| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1982 |
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| Symbol | |
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| ID | 4604232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2410331 |
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| End bp | 2411290 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639781359 |
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| Product | 3-oxoacyl-(acyl carrier protein) synthase III |
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| Protein accession | YP_927857 |
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| Protein GI | 119775117 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
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| TIGRFAM ID | [TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000251663 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000708854 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCATACAA AAATTCTTGG AACTGGCAGT TACCTGCCGG CTCAGGTGCG TAGCAATCTC
GATCTGGAAA AAATGGTGGA TACCAGTGAC CAGTGGATTG TTGAACGCAC AGGTATTTCC
GAACGTCGCA TCGCTGCCAT GGACGAGACT GTTTCTACCA TGGGTTACCA GGCCGCATTG
AAAGCCCTCG AGATGGCGGG TATTCAAGCA CAAGAGCTGG ACATGATCAT TTGTGGTACC
ACCAGTGCTG CCAATGCATT TCCCGCCGCC GCCTGTGAAG TTCAGGCACT CCTGGGGGTT
CACACCATTC CTGCATTTGA TGTTGCCGCT GCCTGCTCCG GTTTCGTTTA TGCCCTGTCG
GTTGCCGATC AGTTCGTCAA AACCGGCGCT GCCAAAAAAG TGCTTGTGAT TGGTGCCGAT
GTGCTCTCTC GCCTGTGTGA ACCCGAAGAC CGCACCACCA TTATTCTCTT TGGTGATGGC
GCCGGTGCCG CTGTAGTCGG TGCCAGTGAA GAGCCGGGGA TCATCAATAC TCACATCTAT
GCAGATGGCC GTCAGGGCGA CCTGCTCAAA TGTGCCTTCC CACCACGTCT GGGTGAATCT
TCAGAAGCCG TGGGCTTTAT GCAGATGAAG GGCAACGATG TGTTCAAGGT TGCCGTGACT
CAGCTGTCCC ATGTCGTGGA AGAAACCCTG CGCCTCAATA ATGTGGACAA GGCAGAGATT
GACTGGCTGG TACCCCACCA GGCGAACTTC CGTATTATCA ATGCCACTGC AAAGAAGCTC
GACATGAGTT TAGATAAAGT GGTGTTGACG CTTGCCAAAC ACGGTAACAC TTCCGCTGCC
TCTGTGCCGA TTGCCCTGGA TGAAGCTGTG CGTGATGGAC GTATTCAGCG GGGACAATTG
CTGCTTTTGG AAGCCTTTGG CGCCGGTTTT GCCTGGGGTA GTGCGCTGGT GCGCTTCTAA
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| Protein sequence | MHTKILGTGS YLPAQVRSNL DLEKMVDTSD QWIVERTGIS ERRIAAMDET VSTMGYQAAL
KALEMAGIQA QELDMIICGT TSAANAFPAA ACEVQALLGV HTIPAFDVAA ACSGFVYALS
VADQFVKTGA AKKVLVIGAD VLSRLCEPED RTTIILFGDG AGAAVVGASE EPGIINTHIY
ADGRQGDLLK CAFPPRLGES SEAVGFMQMK GNDVFKVAVT QLSHVVEETL RLNNVDKAEI
DWLVPHQANF RIINATAKKL DMSLDKVVLT LAKHGNTSAA SVPIALDEAV RDGRIQRGQL
LLLEAFGAGF AWGSALVRF
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