| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1980 |
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| Symbol | |
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| ID | 4604230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2408589 |
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| End bp | 2409335 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639781357 |
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| Product | 3-oxoacyl-(acyl-carrier-protein) reductase |
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| Protein accession | YP_927855 |
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| Protein GI | 119775115 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000830224 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000580002 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTCTGTAT CTTTGGATCT GACCGGCAAG GTAGCCCTGG TTACCGGTGC CAGCCGCGGT
ATCGGTAAAG CCATCGCACT GACCCTGGCC GAAGCCGGCG CAACTGTTGT GGGTACTGCC
ACAAGTGAGA AAGGCGCCGC AGCCATTTCC GATTATCTGG GTGACAAGGG TTTTGGTCTG
GTACTTAACG TCACCAGCAG TGAATCCGTT GCCGAAATGT ATACCGCGAT CAAAGAAAAA
GCAGGAGATG TTGATATTCT GGTCAACAAT GCCGGTATCA CCCGCGACAA CCTGCTGATG
CGCATGAAAG ACGAAGAGTG GGAAGAGATA ATCGACACCA ACCTCACGTC TTTGTACCGC
CTGTCCAAGC CGGTAATGCG CAGCATGATG AAAAAGCGTC ATGGCCGTAT CATCAGCATT
GGTTCAGTGG TTGGCACCAT GGGTAATGCC GGACAGGTAA ACTACTCAGC TGCTAAAGCC
GGTTTGATTG GATTTACAAA ATCTCTCGCC AGAGAGGTTG CATCTCGTCA AATTACGGTT
AATGCTATTG CTCCTGGATT TATCCAGACT GACATGACCG ACGAGCTGAC GCCTGAGCAG
CAGCAAGGCA TCATGTCACA GGTGCCGATG GAAAGATTAG GGCAGGCGCA GGAAATTGCT
AATGCCGTCC TGTTCTTGGC CTCGGACGCT GCCGCTTACA TCACGGGTGA AACCCTGCAT
GTAAACGGCG GAATGTACAT GGTTTAA
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| Protein sequence | MSVSLDLTGK VALVTGASRG IGKAIALTLA EAGATVVGTA TSEKGAAAIS DYLGDKGFGL
VLNVTSSESV AEMYTAIKEK AGDVDILVNN AGITRDNLLM RMKDEEWEEI IDTNLTSLYR
LSKPVMRSMM KKRHGRIISI GSVVGTMGNA GQVNYSAAKA GLIGFTKSLA REVASRQITV
NAIAPGFIQT DMTDELTPEQ QQGIMSQVPM ERLGQAQEIA NAVLFLASDA AAYITGETLH
VNGGMYMV
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