| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1978 |
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| Symbol | |
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| ID | 4604228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2406797 |
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| End bp | 2408035 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639781355 |
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| Product | 3-oxoacyl-(acyl-carrier-protein) synthase II |
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| Protein accession | YP_927853 |
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| Protein GI | 119775113 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
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| TIGRFAM ID | [TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000301956 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000574957 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGACAAAAC GTCGCGTAGT GATAACCGGT CTGGGACTGG TAACCCCGGT CGGTAATGAT
GTTGATTCCA CCTGGAAGGC TTTGCTTGCC GGTCAGAGTG GTGTGGCGCC CATCACCAAG
TTTGACGCCA GTGAATTTGC GACCCGCTTC AGCGCGTCGG TAAAAGATTT CGACGTTGAG
CAGTATCTGT CCAAAAAAGA TGCACGCAAG ATGGACCTCT TTATCCAATA CGGCATGGCT
GCTGGCATTC AGGCCATTCG CGATGCTGGC CTTGACATGG AAAAAGAAGA CCCCACCCGC
GTAGGTACCG CCATCGGTGC CGGTATGGGC GGTATGTGGC TGATTGAAGC CGGTCACTCA
GCGCTGATGG CCGGTGGCCC CCGTAAGATC TCCCCCTTCT TCGTACCCAG CACCATCATC
AACATGATTG CCGGTCACCT GTCGATCATG TATGGCATGC GCGGCCCCAA CTTTGCCGTA
ACCACTGCCT GTACCACGGG CGTACACAAT ATCGGTTTTG CCGCTCGCTC TATTGCCTAT
GGCGATGCTG ACGTAATGGT GGCCGGTGGC GCTGAAGATG TGACCTGTCC GCTGGGTGTG
GGTGGCTTTA ACGCTGCCAA GGCGCTCTCG ACCCGCAATG ACGACCCACA AGCGGCAAGT
CGCCCATGGG ATCGTGACCG CGATGGTTTT GTGATTGGTG ACGGCGCTGG TGTACTGGTG
ATGGAAGAGT ACGAGCACGC CAAAGCCCGT GGCGCCAAGA TTTACGCCGA ACTGGTTGGT
TTTGGTATGA GCGGTGACGC TTTCCATATG ACGTCGCCTC CGGAAGATGG CGCCGGTGCG
GCGCTGGCAA TGACCAATGC TCTCAAAGAC AGCGGTCTCT CGCTGGAGTC CATTGGTTAC
ATTAACGCCC ACGGTACCTC AACGCCAGCC GGTGACAAGG CCGAAGCCGC CGCGGTGAAG
TCCGTGTTTG GTGACCACGC CTACAAGCTG ATGGTGAGCT CCACCAAGTC CATGACAGGC
CATTTGCTGG GCGCGGCCGG TGCGGTGGAA GCTATTTTTA CCATTCTGGC GCTGAAAGAT
GGCGCTGTGC CGCCAACCAT CAACCTGGAT AATCCGGATG AAGGTTGCGA TCTTGACTTC
GTGCCCCACG AGGCGCGTCA GACCAGCTTC GAGTATGCCC TGTGTAACTC CTTCGGCTTT
GGCGGCACCA ACGGCTCGCT GTTACTTAAA AAGATGTGA
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| Protein sequence | MTKRRVVITG LGLVTPVGND VDSTWKALLA GQSGVAPITK FDASEFATRF SASVKDFDVE
QYLSKKDARK MDLFIQYGMA AGIQAIRDAG LDMEKEDPTR VGTAIGAGMG GMWLIEAGHS
ALMAGGPRKI SPFFVPSTII NMIAGHLSIM YGMRGPNFAV TTACTTGVHN IGFAARSIAY
GDADVMVAGG AEDVTCPLGV GGFNAAKALS TRNDDPQAAS RPWDRDRDGF VIGDGAGVLV
MEEYEHAKAR GAKIYAELVG FGMSGDAFHM TSPPEDGAGA ALAMTNALKD SGLSLESIGY
INAHGTSTPA GDKAEAAAVK SVFGDHAYKL MVSSTKSMTG HLLGAAGAVE AIFTILALKD
GAVPPTINLD NPDEGCDLDF VPHEARQTSF EYALCNSFGF GGTNGSLLLK KM
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