| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1976 |
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| Symbol | |
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| ID | 4604226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2404559 |
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| End bp | 2406097 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639781353 |
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| Product | carbohydrate kinase, FGGY |
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| Protein accession | YP_927851 |
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| Protein GI | 119775111 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00288575 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTGAAA CCGGTTATTA CCTTGCTCTC GATTACGGCA CACAGAGCAC CCGCGCGCTG
GTGTTTGACC GCCGCGGCAA TCCCATTGCC ATTGCGGCCG TTGGCAACCA AAACTGTAAA
GCCGGACAAG TGGCCAAAGC CGCAGTGCAG GATGGCGATT ACTGCTACGG CCAACTGGTG
GCGACTTGTC GTAAGCTCTT TGCCGAACAC GGCTTGAGCC CTGAGCAAAT CGTTGCAGTC
ACTCTAACCA CCCAAAGAGC CTGCACCTTG CTGATGGATA ACAGCGGCAA GGCCAAATCC
GATGTGTTTA TGTGGTCCGA CAGACGCATG GTGGAAGGGA TGCTTTCGCC GATAAGCTGG
TTTTATCGGC TCGGCTTTTG GGTAAGCGGT ATGACAGGGC GCATCGACTA TTTGCGCCGG
GCCGCCAAAA TCAACCTGAT GCGCGAGCTT TTTCCCGGCA AGGTCGATGG CAGCGAAAAG
ATTGGCCTCT TGAGTGGTTA TCTGCTGAGC CGCCTTGGGG GCAAGCTGTT GGATTCAAGG
GCATCCCAAG TAGCCTATTT GCCCTTTGAC TACCGAAATC AAACCTTTGC TTCAAAGGGC
AGTTGGCGCT GGCAGGCCCT TGGCTGCAAA CCGTCGCAGA TGCTGCCACT CATTGATGCC
GCAAGGCAGA TTGGCACTAT TACCGATGGC TTTGCCGAGC TTACCGGCCT TAAGCCGGGC
ACAGTGCTGG TCAGTGCCGG TGCCGACAAG GCCTGTGAAG CCTATGCCAA TGGCGCAGGT
GGGCCAGGTG TGTTGTCATT GAGCCTTGGC AGCGCGGCAA CTGTTACCTT GGGATCTCAT
CGCTATTTTG AGGTGTTTCG CTATGCACCG GCCTTCCCGG GGCTTGAGCC GGGCAGTTTT
ATGCCCGAGG TGCAACTCGA GCGTGGCTTT TGGTTGCTGT CGTGGGCGTT GGATGAGTTC
GGTGCCAGCG ACAGGGCTGA AGCAAACTCC CTGGGACTCA GTCCCGAAGC CTATGTGATG
AAAGCCATCG CCGACATTCC GCCAGGCGCC GACGGCCTCA TGCTGTGCCC CTATTGGGCA
CAGGGTGTTA TTTACCCCGG CCCGGAAGCG AGCGGGATAG TCGCAGGTTT TCGCCCTGAG
CATACCCGCG CTCACCTCTA CCGGGCGCTG ATTGAAGGGG TGCTGATGAC ACTCGAGCGA
GGTGCCAAAG AATTGGTGCG TAAGTCAGGT GAAGCAGTAA GGCTTATTCG CGTCAGCGGC
GGCGGTAGTC AATCCGACCT TGTGATGCAA CTGGCAGCGG ATATCTTTGA CTGCCCCACA
GAGCGGTTAA CGGTGCGCGA AAGCTCTGGT TTAGGCGCAG CCATGTGCGC CGCTGTGGCG
ATGGGCGATT ATCCAGACCT CGCCAGTGCC AGGCAAAATA TGGCAAAATC GGGCAGTCGC
TTTGAACCAG AGCCCGCCAG TGTGGCGCGT TACCGGCAGC TATCACAGCG GCACCAACGC
CTGTACCCGG CAGTAAAATC ATTATTTAAA ACACGCTGA
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| Protein sequence | MSETGYYLAL DYGTQSTRAL VFDRRGNPIA IAAVGNQNCK AGQVAKAAVQ DGDYCYGQLV
ATCRKLFAEH GLSPEQIVAV TLTTQRACTL LMDNSGKAKS DVFMWSDRRM VEGMLSPISW
FYRLGFWVSG MTGRIDYLRR AAKINLMREL FPGKVDGSEK IGLLSGYLLS RLGGKLLDSR
ASQVAYLPFD YRNQTFASKG SWRWQALGCK PSQMLPLIDA ARQIGTITDG FAELTGLKPG
TVLVSAGADK ACEAYANGAG GPGVLSLSLG SAATVTLGSH RYFEVFRYAP AFPGLEPGSF
MPEVQLERGF WLLSWALDEF GASDRAEANS LGLSPEAYVM KAIADIPPGA DGLMLCPYWA
QGVIYPGPEA SGIVAGFRPE HTRAHLYRAL IEGVLMTLER GAKELVRKSG EAVRLIRVSG
GGSQSDLVMQ LAADIFDCPT ERLTVRESSG LGAAMCAAVA MGDYPDLASA RQNMAKSGSR
FEPEPASVAR YRQLSQRHQR LYPAVKSLFK TR
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