| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1975 |
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| Symbol | |
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| ID | 4604225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2403659 |
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| End bp | 2404534 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639781352 |
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| Product | 2-hydroxy-3-oxopropionate reductase |
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| Protein accession | YP_927850 |
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| Protein GI | 119775110 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.154488 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00242573 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAAAAG TGGCATTTCT CGGACTGGGG GTGATGGGAT ATCCCATGGC CGGACATTTG
GTCAAGGCTG GTCACCAGGT GACTGTGTAT AACCGGACCA CCGCCAAGGC TGAAGCCTGG
GTGAAGCAGT TTGGTGGCGC CATGGCGCTG AGTCCAAAGC TTGCGGCTGA AGACCAGGAC
ATCGTTTTTA CCTGCGTGGG CAACGATAAA GATTTGCACC AGGTGGTACT TGGAGAAGAT
GGCGTTATCC ATGGTCTCAA TGCAGGTGCC GTGCTGGTTG ACCACACCAC AGCGTCTGCC
GACATTGCCC GCGAGATTGG CGCCGCGCTG AACGCTCAAG GCTTTGGCTT TGTTGACGCA
CCAGTCTCAG GCGGTCAGGC CGGCGCCGAA AATGGCGTAC TGACCGTGAT GGCAGGCGGT
GATGAAGCCG TGTTTAACCA GGTAAAAGAC GTCATCATGA GCTACGCCCG CTGCGCCGAG
CGTCTGGGTG AAACAGGTGC AGGCCAGCTC ACCAAGATGG TGAACCAAAT TTGTATCGCC
GGTGTGGTCC AAGGGCTGGC CGAAGCACTG CATTTTGCCC GTAGCGCAGG CCTTGATGGC
GAAAAAGTGG TGGAAGTCAT CAGCAAAGGC GCCGCCCAAA GCTGGCAGAT GGAAAACCGC
TATAAGTCCA TGTGGGCCGG TGAGTACAAC TTCGGGTTTG CCATAGACTG GATGCGTAAA
GACTTGGGTA TCGCCCTGGA AGAAGCCCGC CGTAATGGCT CGCATCTGCC GCTGACAGCC
CTTGTGGATC AGTTTTACTC AGAAGTACAG GGCATGGGGG GCAATCGCTG GGATACCTCA
AGCCTGATGG CCCGCCTCGA AAAAAGCCGA AAATAA
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| Protein sequence | MAKVAFLGLG VMGYPMAGHL VKAGHQVTVY NRTTAKAEAW VKQFGGAMAL SPKLAAEDQD
IVFTCVGNDK DLHQVVLGED GVIHGLNAGA VLVDHTTASA DIAREIGAAL NAQGFGFVDA
PVSGGQAGAE NGVLTVMAGG DEAVFNQVKD VIMSYARCAE RLGETGAGQL TKMVNQICIA
GVVQGLAEAL HFARSAGLDG EKVVEVISKG AAQSWQMENR YKSMWAGEYN FGFAIDWMRK
DLGIALEEAR RNGSHLPLTA LVDQFYSEVQ GMGGNRWDTS SLMARLEKSR K
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