| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1970 |
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| Symbol | |
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| ID | 4604220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2398716 |
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| End bp | 2398925 |
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| Gene Length | 210 bp |
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| Protein Length | 69 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639781347 |
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| Product | cold-shock DNA-binding domain-containing protein |
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| Protein accession | YP_927845 |
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| Protein GI | 119775105 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00428125 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0463669 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTCAAG TGACTGGTGT AGTTAAGTGG TTCAACGCTG ATAAAGGCTT TGGTTTTATC
GCTCAGGAAG CTGGCCCAGA TGTGTTTGTT CACTTCCGCG CCATCAACAC TGACGGTTTC
AAGACTCTGG ACGAAGGTCA GAAGGTGTCT TTCACCGTGA CCCAGGGTCA GAAAGGTCCT
CAGGCTGAGA ACGTAACCGT AATCGGTTAA
|
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| Protein sequence | MSQVTGVVKW FNADKGFGFI AQEAGPDVFV HFRAINTDGF KTLDEGQKVS FTVTQGQKGP
QAENVTVIG
|
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