| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1967 |
|---|
| Symbol | |
|---|
| ID | 4604217 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | + |
|---|
| Start bp | 2395839 |
|---|
| End bp | 2396471 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639781344 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_927842 |
|---|
| Protein GI | 119775102 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3132] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.465185 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.175017 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCTTG ATGCCATCGA AGCCAGAATC ATTGGCTGTT TATTGGAAAA AGAAGTTACC
ACCCCGGATC AATATCCCCT TTCGCTCAAT GCCCTGACAC TGGCTTGCAA TCAAAAAAGC
AGCCGGGCCC CCGTCATGGA CCTCTCAGAA ACGCAGGTTC AGGCTGGCAT TGATGAACTC
ACCAAAAAAA GGCTGGTAAG CGAGCAATCC GGATTCGGCA GCCGAGTCGT CAAATATAAA
CACAGGTTTT GTAATACTGA GTTTTCAGAT CTTCAGCTTT CCAGCGCACA GGTTGCGGTA
CTTAGCCTGC TGCTGCTAAG GGGACCGCAG ACACCAGGCG AGCTGAGAAC CCGCGCCGGT
CGTCAACACG ACTTCAAAGA CATTGCTGAA GTCGAAGCGA CCCTGACCGC GCTGGCATCC
CGGGAAACGC CGCTAGTGGT GCAACTTCCC AGAGAGCCGG GTAAAAGGGA GTCGCGATTC
AGCCTCACCA TAGTCGAAGC CACAACAGGC ATGACAACAC ATTCGGTTGC GTCCCAAGTT
GACGAACGGG ACGATAGCCG CATAGCTGCC CTGGAGGAGC GAGTCGCGCA GTTGGAAGCG
CGCCTGGATG CACTCTTATT ACAAACACAC TAA
|
|---|
| Protein sequence | MLLDAIEARI IGCLLEKEVT TPDQYPLSLN ALTLACNQKS SRAPVMDLSE TQVQAGIDEL
TKKRLVSEQS GFGSRVVKYK HRFCNTEFSD LQLSSAQVAV LSLLLLRGPQ TPGELRTRAG
RQHDFKDIAE VEATLTALAS RETPLVVQLP REPGKRESRF SLTIVEATTG MTTHSVASQV
DERDDSRIAA LEERVAQLEA RLDALLLQTH
|
|---|
| |