Gene Sama_1958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1958 
Symbol 
ID4604208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2387986 
End bp2388336 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content45% 
IMG OID639781335 
Producthypothetical protein 
Protein accessionYP_927833 
Protein GI119775093 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.323236 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.342733 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCACTG ATAAAGAAGG TTACGTGCAT CTCATACAGT ACTTAACTGA AAACTTGGGG 
CTTTTCGAAG CGCCTGAGGG AAAGGGTTTA GCTGATGAGA CAGTGATGGA GCTCTTTGAA
GAGCAGTTGT CCGCGCAGAT CATCATGGTT TGCGGTCAAA ATCCCGAATT AAGTTTTGCC
CAACGTAACA TGGTCATTCG GGAAATCGAC GCCATCGTTT ACGATCTCGA AGAAATCCTG
GCCCATGTTG GAAACAAAAA AGCCACGCCG GAACAAACGC ACTTTATTGC TGATTTCTCT
GGGCTCATCA AAAATTTATT CGACCAGGAA ATTGTCAAGC TGACCGCATG A
 
Protein sequence
MVTDKEGYVH LIQYLTENLG LFEAPEGKGL ADETVMELFE EQLSAQIIMV CGQNPELSFA 
QRNMVIREID AIVYDLEEIL AHVGNKKATP EQTHFIADFS GLIKNLFDQE IVKLTA