Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1953 |
Symbol | pheS |
ID | 4604203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 2381027 |
End bp | 2382010 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639781330 |
Product | phenylalanyl-tRNA synthetase subunit alpha |
Protein accession | YP_927828 |
Protein GI | 119775088 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0016] Phenylalanyl-tRNA synthetase alpha subunit |
TIGRFAM ID | [TIGR00468] phenylalanyl-tRNA synthetase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00432412 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCAAT TAACAGAGAT TGTGGAACAG GCTCTGGCCG CCATCGAACA GGCGACAGAT CTGAAGGTTC TGGACGATAT CCGGGTTGAT TATCTCGGTA AAAAAGGCCA GATCACCGAC CTAATGAAAC TGATGGGCAC CCTGAGTGCA GAAGAGAAGC CCAAGTTCGG TCAGGCAGTA AACGATGCCA AACAGAGCGT TCAGGCCAAA CTCGGTGAGC AGATGGAGCT GTTTAAAGCC CGCGAACTGG AAGCCAAACT GGCCGCAGAG CAAATCGACG TGACTCTGCC AGGGCGTACT CTGGATAATG GCGGCCTGCA CCCAGTGACC CGCACCATTG AACGTATTGA ATCTTTCTTT GGCGAGCTTG GTTTTACCGT TAAGCAAGGT CCAGAAATCG AAGATGACTT CCACAACTTC GATGCGCTGA ACATTTCTGA ACATCATCCG GCCCGTGCCG ACCACGATAC CTTTTATTTC AATCCCAAGG TGATGTTGCG TACCCAAACC TCGGGCGTGC AAATTCGCAC CATGGAAACG GAAAAACCAC CGCTGCGGAT TATCTCTCCC GGCCGTGTGT ACCGTAACGA CTACGACATG ACCCATACCC CGATGTTCCA TCAGGTGGAA GGTCTCTTGG TGGATGAAAA CGTTAACTTT GCAGAGCTTA AAGGCATTCT GCATGATTTC CTGCGTAACT TTTTTGAAGA AGACCTGCAG GTACGTTTCC GTCCGTCTTA CTTCCCATTT ACCGAACCTT CAGCCGAAGT GGACGTAATG GGCAAAAATG GCAAGTGGCT CGAAGTGCTC GGTTGCGGCA TGGTACACCC CAACGTACTG CGCAGCGTGG GTATCGACCC TGAGAAGTAT TCCGGTTTTG CTTTTGGTAT GGGTGTTGAG CGTTTGACCA TGCTGCGCTA TGGCGTAAAC GATCTGCGCG CATTCTTCGA AAACGACCTG CGTTTCCTCA AGCAATTCAA ATAA
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Protein sequence | MQQLTEIVEQ ALAAIEQATD LKVLDDIRVD YLGKKGQITD LMKLMGTLSA EEKPKFGQAV NDAKQSVQAK LGEQMELFKA RELEAKLAAE QIDVTLPGRT LDNGGLHPVT RTIERIESFF GELGFTVKQG PEIEDDFHNF DALNISEHHP ARADHDTFYF NPKVMLRTQT SGVQIRTMET EKPPLRIISP GRVYRNDYDM THTPMFHQVE GLLVDENVNF AELKGILHDF LRNFFEEDLQ VRFRPSYFPF TEPSAEVDVM GKNGKWLEVL GCGMVHPNVL RSVGIDPEKY SGFAFGMGVE RLTMLRYGVN DLRAFFENDL RFLKQFK
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