| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1950 |
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| Symbol | |
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| ID | 4604200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2377316 |
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| End bp | 2378242 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639781327 |
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| Product | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase |
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| Protein accession | YP_927825 |
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| Protein GI | 119775085 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1560] Lauroyl/myristoyl acyltransferase |
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| TIGRFAM ID | [TIGR02208] lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.170241 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTATT TTGACAGACG ATTTTACTGG GGACTCCTGC ATCCAAGACT GTGGGGAACC
TGGGTTGCCA TCGGCGTCTT GCTCTTTTTT GGCGCCTTGC CTGCCGCTAT TCGCGATCCC
ATCGCGCGTG GTCTGTCCGG GCTGGTACTG GGTATCGCTA AAAAGCCAAT CCGGGTAGCA
AGGGCCAATA TTAAGGCTTG TTTCCCTGAC AAATCAGATA GGGAAGTGGA GGCGCTAATT
CGTGAGAATG TAGCGCAGTT CGTGATGATC CTGATTGGGC AGGCCGAGCT CCTGTTCGGC
AGTGACGCTC ATTTACGCCG CCGCGTTTCG CTGCACGGCT TTGAGCACGT GAAAGCTGCC
CGCGACGCTG GGCAGCCAAT TATTTTCATT ATGCCCCATG TATGGGGTAT AGATTACGCC
GGGCTTAGGT TAAACCTTGA GGTACCGATG GCGACCATGG CCAAGGCGCA TCGTAATGAA
CTCTTTAATT GGTTTTCCAA CCGTATCCGC AGTCGCCTTG GCGGCCATGT CTACATGCGT
GAGGCGGGTC TTAGAGTGCT AATCAGCGAG ATGCGCCAGG GGAACAGCTT CTTTTACTTA
CCTGACGAAG ATTTAGGGCC AGATCAAAGC GTATTTGCAC CGCTTTTCGC TACCACTAAG
GCCACATTAC CAGTGGTAGG GAGGCTGGCT GCAGCCGGTA AAGCCCAGGT GATGCCGGTG
ACCATTGGTT ACGATGATAA GGCTCACCGG TTTTCACTCA CCGTGCTGCC CGCTATCGAC
GAAGCGACCA TGGCAGGCAA AGAAAATGAA GCACTGGCGC TCAACCGCGC TGTTGAGCAG
GTTATTTCGG CCTACCCTGA GCAGTATATG TGGTTTTTAA AGCTGCTTAA AACCCGGCCA
GAGGGCCAGG CGTCTATTTA CGATTGA
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| Protein sequence | MRYFDRRFYW GLLHPRLWGT WVAIGVLLFF GALPAAIRDP IARGLSGLVL GIAKKPIRVA
RANIKACFPD KSDREVEALI RENVAQFVMI LIGQAELLFG SDAHLRRRVS LHGFEHVKAA
RDAGQPIIFI MPHVWGIDYA GLRLNLEVPM ATMAKAHRNE LFNWFSNRIR SRLGGHVYMR
EAGLRVLISE MRQGNSFFYL PDEDLGPDQS VFAPLFATTK ATLPVVGRLA AAGKAQVMPV
TIGYDDKAHR FSLTVLPAID EATMAGKENE ALALNRAVEQ VISAYPEQYM WFLKLLKTRP
EGQASIYD
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