| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1946 |
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| Symbol | |
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| ID | 4604196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2374027 |
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| End bp | 2374764 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639781323 |
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| Product | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase |
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| Protein accession | YP_927821 |
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| Protein GI | 119775081 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
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| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCATTC CTGCAATTGA CCTTATCGAT GGTCAGGTGG TGCGCCTGTT TCAGGGCGAT
TACGCCAAAA AGACCGAATT TTCACTGGAC CCCAAGAACC AGCTGCTGAG TTATCAGCAG
GATGGCGCTG CACTCTTGCA CCTTGTTGAT CTAACCGGCG CTAAAGATCC GGACAAAAGG
CAAACCAAGT TAATCGAAGA GATTGCGGCC AGTTTGTCCA CCCCGCTGCA AGTCGGCGGC
GGCATTCGCA GCGCTGCAGA CGTGGATGCC CTGCTGAATG CGGGCGTTGC CCGGGTGGTT
ATCGGCTCGC TGGCTGTCAA ATCACCTGAG GTAGTACTGC GCCTTTTTGA TAAGTATGGC
GGCGATGCCA TTTGTCTTGC CCTTGACGTC AATATAGATG CCGACGGCAA CAAGATGGTG
GCGGTTCACG GCTGGCAACA GGGCGGCGGC AAGTCGCTGG AATCCTTGGT GGATACCTTT
ATGCCCGCAG GCCTTAAACA TGCACTGGTG ACCGACATCA GCCGCGATGG CACCATGACC
GGCGCCAATA CAGCCCTTTA CTGTGAACTG GCCGAGCGCT TCAACGAGGT ACAGTGGCAG
GCCAGTGGCG GCGTGGCGAC CCTTGATGAC GTAAAGGCCG TCAAAACCTC TGGTGCCAGT
GGTATCATTA TCGGTAAGGC GCTGCTAACC GGCGTGTTCA GTGCAAAGGA GGCAATTGCA
TGCTGGCCAA ACGTATAG
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| Protein sequence | MIIPAIDLID GQVVRLFQGD YAKKTEFSLD PKNQLLSYQQ DGAALLHLVD LTGAKDPDKR
QTKLIEEIAA SLSTPLQVGG GIRSAADVDA LLNAGVARVV IGSLAVKSPE VVLRLFDKYG
GDAICLALDV NIDADGNKMV AVHGWQQGGG KSLESLVDTF MPAGLKHALV TDISRDGTMT
GANTALYCEL AERFNEVQWQ ASGGVATLDD VKAVKTSGAS GIIIGKALLT GVFSAKEAIA
CWPNV
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