Gene Sama_1941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1941 
SymbolhisG 
ID4604191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2368941 
End bp2369834 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content55% 
IMG OID639781318 
ProductATP phosphoribosyltransferase 
Protein accessionYP_927816 
Protein GI119775076 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0040] ATP phosphoribosyltransferase 
TIGRFAM ID[TIGR00070] ATP phosphoribosyltransferase
[TIGR03455] ATP phosphoribosyltransferase, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCCA GACTGAGAAT CGCCATTCAA AAATCCGGAC GCCTGTCCAC CGAGTCCCAA 
CAGCTGCTGA AAAGCTGCGG GGTAAAATTC AGCGTGAATG AACAGCGGCT TATCGCCCAC
GCCGACAATA TGCCCGTGGA TATTTTGCGG GTGCGCGACG ATGACATCCC CGGCCTGGTG
ATGGATGGTG TGGTCGATTT AGGCATAGTC GGTGAAAACG TGCTGGAAGA AGAGCAGCTT
GAGCGCGACT GCCTGGGCAA TGCCTCTGAC GTCGTTAAGC TCAGACAACT GGACTTTGGC
GCCTGCCGTC TGTCGCTGGC GGTACCGACC GAATTTGTCT ATGGCGATGC CAGCTCACTG
GAAGGCCTTA GGATCGCGAC CTCCTACCCC AACCTGCTCC GCCGTTTTAT GCAGAATAAA
GGCATATCCT ATCAGGACTG CCAATTAAAA GGATCTGTGG AAGTGGCGCC CCGTGCTGGC
CTTGCCGATG GTATCTGCGA TCTGGTGTCG ACCGGTGCCA CCCTCGAAGC CAACGGCCTG
TACGAAACTG AAGTCATCTT CCGCTCCATG GCTTGTATTA TTCAGTCCAC TACACCGCAA
AGTGATACCA AGCAGGCACT TATCAACAAA ATCCTCTCCC GGGTCAATGG GGTTATCCGT
GCCCGTGAAA GCAAATACAT CCTGCTGCAC GCCCCAACAG AAACCCTGGA GCAAATCGTC
GCCCTGCTGC CCGGCGCCGA AAACCCAACC GTACTGCCGC TGAACGACGA AACCAACCGT
GTTGCCATCC ACGCGGTCAG CACCGAAGAC TTGTTCTGGG ACACCATGGA AGAACTGACG
GCCCTCGGTG CCAGCTCGAT TCTGGTGATG CCAATCGAAA AAATGATGGG GTAA
 
Protein sequence
MTARLRIAIQ KSGRLSTESQ QLLKSCGVKF SVNEQRLIAH ADNMPVDILR VRDDDIPGLV 
MDGVVDLGIV GENVLEEEQL ERDCLGNASD VVKLRQLDFG ACRLSLAVPT EFVYGDASSL
EGLRIATSYP NLLRRFMQNK GISYQDCQLK GSVEVAPRAG LADGICDLVS TGATLEANGL
YETEVIFRSM ACIIQSTTPQ SDTKQALINK ILSRVNGVIR ARESKYILLH APTETLEQIV
ALLPGAENPT VLPLNDETNR VAIHAVSTED LFWDTMEELT ALGASSILVM PIEKMMG