| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1934 |
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| Symbol | |
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| ID | 4604184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2360791 |
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| End bp | 2362467 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639781311 |
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| Product | long-chain-fatty-acid--CoA ligase |
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| Protein accession | YP_927809 |
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| Protein GI | 119775069 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.015964 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACAAGC CTTGGATTAA TCATTTGCCA CACGATGTGC CTGCTGAAAT TGATGCGGGC
AGATTTGACA GTTTGGTCGA CATGTTTGAA CAGGCGGTGA GGGATTACGC CGATCAACCA
GCCTTTATTA ACATGGGTGC GGTGTTGACC TACCGTAAAC TGGAAGAGCG CAGCCGCGCC
TTTGCCGCCT ACCTGCAAAA CGAGCTTGGT CTTAAGAAGG GTGACAGGGT CGCGCTGATG
ATGCCCAATC TGCTGCAATA CCCCATTGCA CTGTTTGGTG TGCTGCGTGC AGGCTTAGTG
GTGGTGAACG TCAATCCGCT GTATACCCCG CGGGAGCTTA AGCATCAACT GATTGATTCT
GGAGCGAAAA CCATCGTAGT CGTGTCAAAT TTTGCCCGCA CCCTTGAAGA GGTTGTGGAC
GACACGCCGG TAGAAAGCGT CATTATTACT GGGCTTGGCG ACTTGCTGAG CGCGCCCAAG
CGTACCTTGG TGAACTTTGT GGTGAAGTAC ATCAAAAAGT TGGTGCCCAA GTACGATTTG
CCACATGCTA TTTCCTTCAG GAGCGCCCTG CAAAAAGGCC GCCGTATGCA GTATGTCAAG
CCAGAGCTCG ACATAGATAC ACTGGCGTTT TTGCAATACA CAGGTGGCAC TACGGGCGTA
TCAAAAGGCG CCATGCTGAG CCACGGTAAC GTGGTTGCCA ACGTATTACA GGCTAATGGA
GCCTATGCGC CGCTGCTGGC CGATGGTAAG GAGTTTGTGG TCACGGCTCT GCCGCTTTAT
CACATCTTTG CTTTAACGGT GAATTGCTTG CTGTTCCTGC ATAAAGGCGC ACAAAACCTG
CTTATTACCA ACCCCCGTGA CATTCCGGCC TTTATATCGG ACCTGCGCAA GTATCCTTTT
ACCGCGCTGA CCGGGGTGAA TACGCTCTTT AACGCCCTGG TGAACAACGA AGAGTTTACC
CAGCTGGATT TCTCTCGCCT TAAACTGTCT ATTGGCGGCG GTATGGCGGT GCAGCGCGCG
GTCGCCGACA AGTGGCAGAG TATCACCAAA ACCCGCTTGC TTGAGGGCTA TGGTTTGACA
GAAGCTTCGC CGCTGGTGGC CTGCTGCCCC TATAACCTTG AAGGTTACAA CGGTTCTATT
GGTTTCCCGG CGCCTTCGAC CCTGATGCAG GTGCGTGACG ATGATGGGAA TGTTCTGCCC
CAGGGCGAAA CAGGTGAACT CTTCGCCAAA GGTCCCCAAG TGATGAAAGG CTACTGGCAA
CGCCCGGAAG AAACCACCAA AGTAATAGAT GCCAATGGTT GGCTTGCCAC CGGTGATATC
GGTTACATGG ATGAACAGGG ATTTTTCTAC ATAGTCGATC GCAAGAAAGA CATGATCCTG
GTGTCGGGCT TCAACGTGTT TCCCAATGAG GTGGAAGATG TGGTTGCCAT GCACCCGAAA
GTGATTGAAG TCGCCGCCAT CGGCGTGCCC AATGACGCCA GTGGTGAAAT CGTTAAAGTC
TTTGTGGTAG CCAAAGACAA ATCTTTGACC GAAAGCGATG TTATCAAGCA CTGCAAGCAT
CATTTAACGG GCTATAAGGT TCCTAAGCTG GTAGAATTCC GCGATGAGTT ACCTAAGACC
AACGTGGGTA AAATATTGCG CCGAGAGCTT AGAAACGAGG AGCTTAACAA GGCGTGA
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| Protein sequence | MDKPWINHLP HDVPAEIDAG RFDSLVDMFE QAVRDYADQP AFINMGAVLT YRKLEERSRA
FAAYLQNELG LKKGDRVALM MPNLLQYPIA LFGVLRAGLV VVNVNPLYTP RELKHQLIDS
GAKTIVVVSN FARTLEEVVD DTPVESVIIT GLGDLLSAPK RTLVNFVVKY IKKLVPKYDL
PHAISFRSAL QKGRRMQYVK PELDIDTLAF LQYTGGTTGV SKGAMLSHGN VVANVLQANG
AYAPLLADGK EFVVTALPLY HIFALTVNCL LFLHKGAQNL LITNPRDIPA FISDLRKYPF
TALTGVNTLF NALVNNEEFT QLDFSRLKLS IGGGMAVQRA VADKWQSITK TRLLEGYGLT
EASPLVACCP YNLEGYNGSI GFPAPSTLMQ VRDDDGNVLP QGETGELFAK GPQVMKGYWQ
RPEETTKVID ANGWLATGDI GYMDEQGFFY IVDRKKDMIL VSGFNVFPNE VEDVVAMHPK
VIEVAAIGVP NDASGEIVKV FVVAKDKSLT ESDVIKHCKH HLTGYKVPKL VEFRDELPKT
NVGKILRREL RNEELNKA
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