Gene Sama_1929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1929 
Symbol 
ID4604179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2357226 
End bp2357504 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content45% 
IMG OID639781306 
Producthypothetical protein 
Protein accessionYP_927804 
Protein GI119775064 
COG category[S] Function unknown 
COG ID[COG3100] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000893078 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATATGTG CCGTTTATAA AAGCAGCCGT AAGCAAGAAA CCTACTTATT CGTACCCAAA 
AGAGATGATT TCAGCCAGGT GCCAGAGCCT TTATTACAGA TGTTTGGTAC ACCTTTGCTG
GTAATGCTGT TGCCGCTCGA CAGGAAAGAG AAGCTTGGGA TTGCCGATAT CGACAAAGTG
CGCAGCGAAC TCGCTCAAAA AGGCTATTAT TTGCAATTGC CACCCCCTAA AGATAATTTA
CTGACGCAAC ACCGCCGCGA TTTAGGCATA GAGGATTGA
 
Protein sequence
MICAVYKSSR KQETYLFVPK RDDFSQVPEP LLQMFGTPLL VMLLPLDRKE KLGIADIDKV 
RSELAQKGYY LQLPPPKDNL LTQHRRDLGI ED