| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1925 |
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| Symbol | nhaB |
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| ID | 4604175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2353434 |
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| End bp | 2355020 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639781302 |
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| Product | sodium/proton antiporter |
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| Protein accession | YP_927800 |
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| Protein GI | 119775060 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3067] Na+/H+ antiporter |
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| TIGRFAM ID | [TIGR00774] Na+/H+ antiporter NhaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000922485 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATTGA CTCTTGGGCA GTCACTGTTT GCCAACTTTC TGGGTAATTC GCCCAGATGG
TATAAGTTCG CGATCCTGTC GTTTCTGGCG ATAAATCCGA TACTCTTTTA CCTGAACCCC
TTTATTGCAG GTTGGGTTTT GGTTATCCAG TTTATTTTCA CCCTGGCCAT GGCCCTTAAA
TGTTATCCCC TGCAGCCCGG TGGTTTGCTT GCCATTGAAG CCGTGATCAT CGGCATGACC
AGCCCCACAC AGGTGTTACA CGAAATCCAG GCCAATCTGG AAGTACTGCT GCTTCTGGTG
TTTATGGTCG CTGGCATCTA CTTTATGAAA CAGCTGCTGC TGTACGCCTT CACCAAGATG
TTGACCAAGG TACGTTCGAA AATCGTCGTA TCCATGCTGT TTTGTATTGC GTCGGCGTTT
TTGTCGGCCT TCCTCGATGC CCTTACTGTC ATTGCGGTGA TCATTACAGT GGCTGTGGGT
TTCTACTCTA TCTACCATAA AGTGGCATCG GGTAAAGACT TCAGCTCCGA TCACGACCAC
ACCTCGGAAG CACCGGAGCA GCTTAACGAA AGCGAGCTTG AGTCATTCCG TGGATTTTTG
CGTAACCTCT TGATGCACGC CGGTGTGGGT ACTGCCCTTG GTGGCGTGTG CACCATGGTT
GGCGAGCCCC AAAACCTCAT TATCGCAGCT CAGGCCAACT GGCAATTTGG CGAATTTGCC
ATTCGCATGT CACCTGTCAC TGTGCCGGTG TTTTTTGCCG GGATCTTGAC CTGTTTTATC
GTGGAAAAAT TTAAATGGTT TGGTTACGGC GCCAAACTGC CTGAGGCTGT ACATAAGATC
TTGAGCGAAT ACGATGCATA CGAAGATGCC CGCCGCACAC CTAAAGATAA GGTCAAGCTC
ATCGTACAGG CATTGGTGGG TGTTTGGCTG ATTGTAGGTC TTGCATTCCA CCTCGCATCA
GTAGGCCTGA TTGGTCTCTC TGTGATTATC CTTAACACCG CCTTCAACGG CATTACCGAC
GAGCATGCTC TGGGTAAAGC GTTTGAAGAA GCCCTACCCT TTACGGCGCT GCTGGCGGTA
TTCTTTGCAG TAGTAGGGGT TATTATTGAC CAGCAACTTT TCGCGCCGGT TATCCAGTGG
GCACTCAGCT ACGAAGGCAA TGTACAGCTG GTTATCTTCT ACATCGCCAA TGGCCTGCTC
TCTATGGTCA GTGACAACGT GTTTGTGGGT ACCGTGTATA TCAACGAGGT GAAGGCTGCG
CTGCTTAATG GGCAAATTAC CCGTGACCAG TTTGATTTGC TGGCCGTTGC CATCAACACT
GGCACCAACC TGCCATCTGT GGCCACCCCA AATGGTCAGG CTGCCTTCCT GTTCCTGCTG
ACCTCAGCCC TGGCTCCGCT CATTCGCCTG TCCTATGGTC GCATGGTGAT GATGGCTCTG
CCATACACCA TAGTGCTGTC TATCGTAGGC ATCCTGGCCA TTGAATCGGG CTTTCTCACC
GATATGACCC AGTATTTCTA TGACAGCCAT CTGATTAACC ATCACACCGC AGCGGAAGCT
GCAGGCAAGG CTCTGGGTGG ACATTAA
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| Protein sequence | MPLTLGQSLF ANFLGNSPRW YKFAILSFLA INPILFYLNP FIAGWVLVIQ FIFTLAMALK
CYPLQPGGLL AIEAVIIGMT SPTQVLHEIQ ANLEVLLLLV FMVAGIYFMK QLLLYAFTKM
LTKVRSKIVV SMLFCIASAF LSAFLDALTV IAVIITVAVG FYSIYHKVAS GKDFSSDHDH
TSEAPEQLNE SELESFRGFL RNLLMHAGVG TALGGVCTMV GEPQNLIIAA QANWQFGEFA
IRMSPVTVPV FFAGILTCFI VEKFKWFGYG AKLPEAVHKI LSEYDAYEDA RRTPKDKVKL
IVQALVGVWL IVGLAFHLAS VGLIGLSVII LNTAFNGITD EHALGKAFEE ALPFTALLAV
FFAVVGVIID QQLFAPVIQW ALSYEGNVQL VIFYIANGLL SMVSDNVFVG TVYINEVKAA
LLNGQITRDQ FDLLAVAINT GTNLPSVATP NGQAAFLFLL TSALAPLIRL SYGRMVMMAL
PYTIVLSIVG ILAIESGFLT DMTQYFYDSH LINHHTAAEA AGKALGGH
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