Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1918 |
Symbol | |
ID | 4604168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 2344815 |
End bp | 2346044 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639781295 |
Product | uracil-xanthine permease |
Protein accession | YP_927793 |
Protein GI | 119775053 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG2233] Xanthine/uracil permeases |
TIGRFAM ID | [TIGR00801] uracil-xanthine permease |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00881195 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAGAC TCCTGCTTCC CCTGCAGGGC GCACAAATGT TGTTTGTCGC CTTTGGGGCA CTGGTGTTGA TGCCGCTGTT GACGGGCCTG GATACCAGTG TTGCGCTCTT TACCGCCGGC ATAGGCACCT TGTTGTTTCA GCTGATCACC CGCCGTCAGG TACCCATATT CCTCGCTTCC TCCTTCGCGT TCATTGCCCC GATCATGTAC TCAGTGCAGA TGTGGGGTGT GGCTGCAACT ATGGGCGGCT TGGTCGCGGC TGGCTGTGTG TATCTGGTAT TGTCCACGCT GGTAAAACTG CGGGGAGTTG GCTTTATCCA TCGCCTGTTA CCCCCCGTGG TGGTTGGTCC CGTGATCATT ATCATTGGCT TGGGACTGGC GCCCGTCGCT GTGAATATGG CGCTCGGTAA GAGTGGCGAT GGCAGCCTGG TATTGGTTGA AGGAAACACA GCCCTTATCA TCTCGCTGCT GTCCCTTATC ACCACAGTCT TGGTTGCCGT GCTGGCAAAA GGCCTACTAA AACTCATGCC CATTCTCGCC GGGATTTTGG TGGGTTATGT GGCCAGCCTT TTTTATGGCG TAGTAAGCTT TGATGCCATG ACCAATGCCC CCTGGTTTTC CCTGCCAAGC TTTACAGCAC CGGAATTCCA CTGGCAGGCC ATCCTCTTCA TGATCCCCGT GGCCATTGCT CCTGCGGTCG AGCACATCGG CGACATCCTG GCTATCTCCA ACGTGACCCG TAAAGACTTT ATGAAAGACC CTGGCCTGCA CCGCACCCTT GCCGGCGACG GGGTAGCCAC CATTGCTGCA GCCGCCTTTG GCGGACCACC CAATACCACC TACTCGGAAG TGACAGGCGC GGTCACCTTA ACCCGCAACT TCGACCCCAG GATCATGACC TGGGCAGCGA TTGTGGCCAT TTTGCTGGCC TTCGTTGGCA AACTTGGTGC CTTGATGCAA ACCATACCCG TGCCTGTGAT GGGCGGTATC ATGTGCTTGC TGTTCGGCTC GATTGCCGCA GTGGGCCTTA ATACCCTCAT TCGCAATCAG GTGGATTTGG CCTGCCCACG CAATCTGGCC ATTGTAGGCG TGACCCTGGT ATTCGGTATT GGCGGCATGG CCTTTGGTAT TGGCTCATTC AGCCTCACCG GCATCAGTTT GTGCGGCATT GTGGCGATTT TAATGAATCT GGTATTGCCA CCGTCAGCGC CCGAGCCTGA AAGCCCATAA
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Protein sequence | MNRLLLPLQG AQMLFVAFGA LVLMPLLTGL DTSVALFTAG IGTLLFQLIT RRQVPIFLAS SFAFIAPIMY SVQMWGVAAT MGGLVAAGCV YLVLSTLVKL RGVGFIHRLL PPVVVGPVII IIGLGLAPVA VNMALGKSGD GSLVLVEGNT ALIISLLSLI TTVLVAVLAK GLLKLMPILA GILVGYVASL FYGVVSFDAM TNAPWFSLPS FTAPEFHWQA ILFMIPVAIA PAVEHIGDIL AISNVTRKDF MKDPGLHRTL AGDGVATIAA AAFGGPPNTT YSEVTGAVTL TRNFDPRIMT WAAIVAILLA FVGKLGALMQ TIPVPVMGGI MCLLFGSIAA VGLNTLIRNQ VDLACPRNLA IVGVTLVFGI GGMAFGIGSF SLTGISLCGI VAILMNLVLP PSAPEPESP
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