| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1913 |
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| Symbol | |
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| ID | 4604163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2340177 |
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| End bp | 2341646 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639781290 |
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| Product | peptidase M48, Ste24p |
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| Protein accession | YP_927788 |
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| Protein GI | 119775048 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.910226 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGTAATT TGACACTTTC CAGACTGACA AAAACGCTCG CTGCGGCGGG TTTATCCATC
ATGCTCACCT TACCGGCAGC CAAGAGTTTT GCGAGCAACG ATTTACCTGA TCTGGGTACG
GCAGCGGTTA ACACCTTCAG TCTGGAAAAA GAAATGATCT ACGGGGATGC CTACATGCGA
GTCATTCGCT CGTCGGCGCC CCTGCTCAAC GACCCTGTAC TGAGCCAATA CCTTACAGAA
CTTGGCAACA AACTTGTCGC CAATGCCACC GGCGTGAAAA CGCCTTTTTA CTTTTTCTTG
CTGCGTAACG ACGAAATCAA CGCCTTCGCG TTTTTCGGGG GCCATGTGGG CGTGCATACG
GGGCTCTTTT TAAATGCTGA CACCGAGAGT GAACTGGCAT CGGTACTGGC CCACGAAATC
ACCCACGTCA CCCAGCGCCA TTTGGCGCGA TCGTTGGAAG CACAGCAAAA ATCGGGGCCT
GCCACCATTG CCGGTCTCCT TGGCGCGATA TTACTTACCA TCGCCGCTCC CCAGGCAGGC
ATGGCCGCTC TCGCCACCAC CCAGGCGCTC GCTACCCAGT CAAAAATCAA CTACACCCGT
CAGCATGAAA AAGAAGCCGA TCGAATAGGG ATGCAAATTC TGGTGGAGGC TGGGTTTGAC
CCCGAAGCGG CAGCAGACTT TTTCGGTAAG ATTGCCAGTC GTTACCGCTT CACCACCAAG
CCGCCACAAA TGCTGTTGAC TCACCCCTTG CCTGAGTCAC GCATAAGCGA AGCCCGCACG
CGGGCGACCC AATACCCTCA CAAGTATGTG CCGGACAGTT TGAACTACCA TTTGGCAAGA
GCCAGGGTAC AGGTCAGGTT CTCCAGTTAC AGTGAAGAAG CGGCACTGAA TCTGTTTGAA
AAACAACTCT CACGCCACAG CTATACCTTT GAAAGTGCAG CCCTCTATGG CAAGGCACTG
GCACTGTTTC GCCTGAAGCG CTTTGAAGAA TCGGAAGCCA TCATCGACAA ATTGCTTGCT
CGGGATGACA ACAATCTGTT CTATCTCGAT ACCAAAACCG ATTTGCTCGC TGAGCGCAAA
GACTTCCAGT CAGCCATCAA GCTGTTGGAG GCCAAGCGTA AACTCAAGCC TACCTCTCAG
GTAATCAATG CCAACCTCGC TAACGTGTAT ATTGAAGCGG ACGAGGGTGC GAAGGCCATT
CCCCTCCTGG AAGACATGGT GTTCCTCGAC AGGCAAAATC CACTGCCTTA CCAGCTGATG
ACCCAGGCCT ACCGAAAAGC TGGCAATAAG GCACTGGAGC ACTTTTCCAC CGCCGAAACC
CTGGCACTTG CAGCAGATTA CAAGGGCGCA GTCGATCAGC TCAACTTCGC CTATCGCTAC
ACCAAGGACG ATGCCTTGCA GCTGGCGCGT ATTGAAGCCC GCATTCGCCA GTTTAAAGAT
GCCGAAAGAG CCCTGGACGA GCTAAAGTAG
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| Protein sequence | MRNLTLSRLT KTLAAAGLSI MLTLPAAKSF ASNDLPDLGT AAVNTFSLEK EMIYGDAYMR
VIRSSAPLLN DPVLSQYLTE LGNKLVANAT GVKTPFYFFL LRNDEINAFA FFGGHVGVHT
GLFLNADTES ELASVLAHEI THVTQRHLAR SLEAQQKSGP ATIAGLLGAI LLTIAAPQAG
MAALATTQAL ATQSKINYTR QHEKEADRIG MQILVEAGFD PEAAADFFGK IASRYRFTTK
PPQMLLTHPL PESRISEART RATQYPHKYV PDSLNYHLAR ARVQVRFSSY SEEAALNLFE
KQLSRHSYTF ESAALYGKAL ALFRLKRFEE SEAIIDKLLA RDDNNLFYLD TKTDLLAERK
DFQSAIKLLE AKRKLKPTSQ VINANLANVY IEADEGAKAI PLLEDMVFLD RQNPLPYQLM
TQAYRKAGNK ALEHFSTAET LALAADYKGA VDQLNFAYRY TKDDALQLAR IEARIRQFKD
AERALDELK
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