| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1902 |
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| Symbol | |
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| ID | 4604152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2325741 |
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| End bp | 2327636 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639781279 |
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| Product | exodeoxyribonuclease V |
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| Protein accession | YP_927777 |
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| Protein GI | 119775037 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR01447] exodeoxyribonuclease V, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAGAAC TTTCAGGCAA GCCCTGTAGC AGTGATGCCC TCAAAGCGCA GCTCAAACTG
TGGCAATCAC AGGGAGAGCT GTCGGCACTG GATCGCCACT TTGCCCTGCA GATGGCCGAG
CTTCACAGTG ACGATTCACC GTTGATGCTG CTGATGTGCG TGTTGGTGTC ACGGCAGCTT
TCCCGTCAGC ATCCCTGTCT TGACTTAAGC GCATTGATGC TTGGCAACCC AATGGGCACC
CGTCAGGCGC AGCTGCGCAT TCTGGCTGAT TACCCTGCAC TGTTGGGTGC CGTTGCCAAT
CTCGATGCCG TTGGCAGCCC GGATGAAAAC AAGCCACTGA TTTTAGAAGG CAAACGTCTC
TACCTTAAGC GCTATCAAGG CTTTGAGAGC CGGGTCGCGG CGCGGCTTAA TGCCATGGCT
GGAACTGAGC TCAGTACTCA TGCCCACACG GCGGCGCTGC TGGAGGCGCT GTTCCCGGTA
GGCAAAGAGG CTATCGACTG GCAAAAAATC GCGGTGGCCA CCGCCGCAGG AAAGCAGCTG
ACTGTCATCA CCGGCGGCCC CGGCACGGGT AAAACCACCA CGGTGACCAA GTTACTGCTG
CTCTTGTCGC TGTCATCCTC ATTGAATATT CGCATGGTGG CGCCCACGGG CAAGGCCGCT
GCCAGACTGT CGGAGTCCAT CAAAGCCAGT AAGCAGCGAC TGACTCAGGA GTTAAACTCG
CCCCTTATCT CCCAGGACGC CATTGCAAGC CTGCCGGAAG ATGCCTCGAC CCTTCACCGT
CTGCTTGGCT TTCAACCTGG CAACCACAAA TTTCGCCATC ACAGAGACAA TCCGCTGGAT
TTGGACTTAT TGCTGGTGGA TGAGGCCTCC ATGGTGGATT TACCCATGAT GGACAGGCTG
CTTGATGCCC TGCCAGGCCA TGCCCGGCTC ATTTTGCTGG GCGATCAGGA TCAGCTCGCT
TCAGTGGAAG CCGGTGCAGT GCTTGCTGAT ATTTGTGAAG GCGCGCGCCA GGGTTACCGC
TACAGCGCGG TACAAACCGC ACGCATCGAG GGGCTCACAG GCACAAAGCT TGCCCCACGC
GCAGACGCCC CCGGGCTTGG CGATAACCTG TGCCGACTGC TGCATAGCCA CAGATTTGCC
GAAGACGCCG GTATTGGGCA GCTCGCCATG GCGGTAAATG AAGGCGACAA AGAGAAAGTC
GCTGCTGTGT GGCAAAAAAA CTACGCAGAG CTGAGCTGGA TCCCGGGTGA TAACAGTGAT
GGGCTCGCAG CCTTGGTGCA ACTGGCCAAA TCCGCCTACA GCGAGTATTT ACAGGCGATG
AAACAGCAGG CCGAGCCTAA AACCATACTG CAAAAGTACA ATGAATTTCG GGTACTCTGC
GCCATGAAAA ACGGCGAGTA TGGCGTGGAT GGTATCAATA GGGCCATTAC CGCAGCCCTT
GCCAGAGCCG GACTGATAGA GCCAAGCCAG GAGTTTTATG CAGGCCGCCC GGTCATGATC
CAGAGTAACG ATTACAGTCT GGGGCTCTTT AATGGCGACA TTGGCATACT GCTTCCGGTA
GAGGGGGATA ACCAGCGCCT GATGACCCAT TTTATTCAAA GCGATGGCCA GGTGCTTAAA
GTCCTGCCGG CGAGACTACC GGGACACGAG ACCTGCTACG CCATGACAGT GCACAAGAGC
CAGGGCAGTG AATTTGCCTC GGTGGCACTA TCCTTACCGC CACAGCCAAC CCCATCCCAA
CAGAGCTTGA TTGGCCGAGA GCTGATTTAC ACCGCCATTA CCCGGGCCAA GTCGAAGTTT
ACCTGCCTTG GGACAGAGGC TTTGTTTGAG GCCGCGACAC AGCGTCGCAC CGAGCGGGCG
TCGGGGCTGG CAGACCGCTT ATGGCATGAG GATTAA
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| Protein sequence | MIELSGKPCS SDALKAQLKL WQSQGELSAL DRHFALQMAE LHSDDSPLML LMCVLVSRQL
SRQHPCLDLS ALMLGNPMGT RQAQLRILAD YPALLGAVAN LDAVGSPDEN KPLILEGKRL
YLKRYQGFES RVAARLNAMA GTELSTHAHT AALLEALFPV GKEAIDWQKI AVATAAGKQL
TVITGGPGTG KTTTVTKLLL LLSLSSSLNI RMVAPTGKAA ARLSESIKAS KQRLTQELNS
PLISQDAIAS LPEDASTLHR LLGFQPGNHK FRHHRDNPLD LDLLLVDEAS MVDLPMMDRL
LDALPGHARL ILLGDQDQLA SVEAGAVLAD ICEGARQGYR YSAVQTARIE GLTGTKLAPR
ADAPGLGDNL CRLLHSHRFA EDAGIGQLAM AVNEGDKEKV AAVWQKNYAE LSWIPGDNSD
GLAALVQLAK SAYSEYLQAM KQQAEPKTIL QKYNEFRVLC AMKNGEYGVD GINRAITAAL
ARAGLIEPSQ EFYAGRPVMI QSNDYSLGLF NGDIGILLPV EGDNQRLMTH FIQSDGQVLK
VLPARLPGHE TCYAMTVHKS QGSEFASVAL SLPPQPTPSQ QSLIGRELIY TAITRAKSKF
TCLGTEALFE AATQRRTERA SGLADRLWHE D
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