| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1900 |
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| Symbol | |
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| ID | 4604150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2318577 |
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| End bp | 2322068 |
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| Gene Length | 3492 bp |
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| Protein Length | 1163 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639781277 |
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| Product | exodeoxyribonuclease V, gamma subunit |
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| Protein accession | YP_927775 |
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| Protein GI | 119775035 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1330] Exonuclease V gamma subunit |
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| TIGRFAM ID | [TIGR01450] exodeoxyribonuclease V, gamma subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCACAC TCGTTCAGTC CAATCACATG GAGCGCCTTG CAAAACGCCT GGCAGACGAA
CTTAATCAGG CATCAGGCAA TGTGCTGGCA ACGGAGCAGA TTTTGGTACA AAGCCCGGGT
ATGGCGACCT GGCTCAGATT GGAAATCGCA GCCCACAATG GCATAGCCGC CGCCCTGAGC
TTCCCCCTTC CCTCGAATTT TATCTGGTCA CTCTGTTATG CCTTGCTGCC GGGTGTCCCC
AAGGAAAACG CCTTTACCAA GGACGCCATG ACCTGGAAGT TGATGGCGCT GTTGCCAAGA
CTGATTGAAA AGCCCCATTT CGAGCCGCTG CGGGACTATT TAAGCAGCGA CTCTCCGCTC
AAATTGTTTC AACTGGCCAG CCGGGTTGCG GACATTTTCG ACCAATATCT GGTTTACCGC
CCCGATTGGA TAGTGACATG GGAACTGGGT GAAAATGACC TTAGCCCAAC TGGCAGCCCC
CTCACCCAAG GTGCTGCGCT GCCCGATAAT TGTTTGTGGC AACCCCTGCT CTGGCGAGCC
TTGGTACAAT ACAACCGGGA TGAACTGGGG CAAAGCCATT GGCATCGCGC CAATTTGCAT
CAGGCACTGG TGGCTGCACT CTCCAACCCA AACACAGATA TCAGTGCCCT GCCCAGGCGG
CTCTTTGTCT TTGGTATTTC ATCACTACCA CCCCAAACCC TGGAAGTGCT CTACGCCCTT
GGCAGCCGCA TTCCTGTGAC CATGCTCAGC CTCAGTCCCT GCCGCCAATA TTGGGGCGAC
ATAGTCGACA GCAAACTCAG GGCCAAGCTG GCGCTGAAAT ACAAAGCCCA CAAGATGCTG
CCGGAACATT GGGAAGAAAC TCTCGAAGTG GGCAACCCCT TGCTCGCCGC CAACGGCAAA
ATGGGCCGGG AGCTGCTGGA TCTGGTACTT TCGCTGCCCC CGGAGCATTT CACTCTCGAC
GACAGTGGCT ATGAAACGAA CGATGACAGC CATCTGTTGG GCAGGTTGCA AAACGATATA
TTGGATATGG AGGTTGCAGG TGCGCCGCTT TGTGCGGATC TCGCCCGCTA TCAGTCCAAC
GAGGGCAAGT TTCTGCTGGA TGAACAGGAT AACAGCCTGG TACTGCGAAG TTGCCACAGC
CCGCTTCGGG AAGTCGAAAC CCTGCACGAC CACCTCCTTG GTCTGCTGTC AGACCGTCAG
GGCCGGCTCT CTGCCAAAAA CATAGTGGTG ATGCTGCCCG ATGTTGCCGC CTACGCGCCC
TTTATTGATG CCGTATTTGC CTCACGCAGG GGCGAACACT ACATCCCCTA CGCTATTGCC
GATCGGGGAG CAGTAGAGGA GTCTCCCCTG ATCCACGGTT TCCTGACCTT GCTCGACATC
AATCACAGCC GCTTCGGCTT GTCAGAAATT CTCGGCTTGC TGGAAATTCC CGCGGTTATG
GCGAAATTTA AGCTGGATGA GGAAGAGCTG TCCCGTCTCG GAAACTGGCT CAGTGAGGCC
GGTGTACGCT GGGGGCGGGA TGCCCAAAGC CGGGAAAAAC TGGGCTTACC CGCCTTTGAT
AAGCATTCCT GGGCCTTTGG TATCCGCAGA TTACTGCTGG GCTTTTCCCT TGGCGACGAG
GGGGATTTCT ATCACGGCAC CCTGCCATTT GCAGGTGTTG AGGGCCAGCA AGCGCAGTGT
GTTGGTAAAC TGCTGGATTT TATTGAGCAT CTCGATGAAT TTGCAGCACG ATTTGCTGCC
GCCGATAGCC TTACACTCAA GTTCGCAGAA CTCAGCCGCC TCACCGATAC CCTGTTTGCA
CCACTGCCGG AATATCAGGA AGAGCTTAAC CTCATCCGTG AAACTCTCTG TGATACCCAA
AAAGCCCTTC AATCGTCGGC AAGCAGCGAA AGCAGCCTCA GCGATATTTC ACTTGAGGTT
ATCTGCCAAA CCCTTGGCAG CAAGCTCACC GATGCCCGGG TCGGACAACG TTTTCTGGCG
GGTTCGGTGA ATTTCTGTAC CCTGATGCCC ATGCGTTCTA TCCCCTTTAA AGTGGTGTGT
TTGCTCGGCA TGAATGAAGG CATTTACCCC AGGGTGCAAC ATCCCGTGGG ATTCGACCTG
ATGGCGAAAA CACCCGCACG ACGTGGCGAT CGTTCACGGC GTCTCGACGA CAGATACCTG
TTTCTGGAAG CCCTGCTGTC AGCGAGAGAG CAGCTTTATA TCAGCTTTAT TGGCCGCAGC
GAGCGCGACG ACAGCGAGCG CCTGCCTTCC ATGCTGGTCA GTGAATTGCT GGACTGCTGT
GAACTGAGCG CTTATGTCTC CCAGGGGAAG CTGGTTAACC GTCTGGTGAA ACAGCAGCCG
CTACAACCCT TCGACCACCG GCTCTACCTG ACCAATCAGG ACATCACTGC GAGCTTTGCT
GCCCAGTGGT GCCCGCAGGA AACCCGTCCG CCGAAGCCCT TTATCGACGC AGTACTGGAC
GAAGTGGATG AAGATGAGCA TAAAGTGCTG GAGCTTGCAT CCCTCATCCG CTTCTACCGG
GATCCAGCCC GCTTTTTCTG CCAGCGACGA CTCAGACTCG ACTTGAGCCA CAGACTCGAT
GCGCTGGATG ACAGCGAACC CTTTGATGTC GATGCCCTCG GGCGCTATCA ACTGCAGGAT
AAGATGCTCA ACGCCGCGTT GGAAGCCGAT GAAATCAGGC AGCAACTGGC TGTAGATACG
CTGTGTGACA GACTTGCCGG GGCCGGTGTT TTACCCATGG CACCGTTCGA CAAGCTGCTC
TTTGCCAGTT ACCAACGGGA TCTGGCGCCC ATTCTCGACC GCTGTCGCTT TATCATGGGT
GAAACTGAGG GACAAAGCCT GAGGATATCA CTCGTCCTTA ATCAAGGGCA CAAACTGGTC
GGCACCATAG ACAAGGTCTT TGCAAAAGGC CTTCTGGTGG CAAGACCGGG CACCGCCAAG
GCCAAAGACG TGCTGGCGCT GTATCTGCGA CACCTTTGTC TGTGCGCCTC AGGCTACCGG
CAGAGCAGTT TCTTGTTGGA TGTGGGTAAC TTCCATGCCT TTTTACCCCT CACGCCCGAT
AACGCCCTGA CAAGCCTTGA GGATTTTATC AGCCACTATT TCGAGTCAGT GCGCACGCCA
TCTCCGCTGA TCCCTGCCCT TGCCATGACC TACATTGAGG CACTTGCCGA AGGCGCCAGT
GAGGAAGAGT CGTTGGCAGA ATTGAGTACC AAATGGGATG ACGGCAATGG AATGGGCGAA
ATTGCCGAGC CCCACAACGA GCGCCTGTTT GAGTTTCCTG CAAGCTTTGC CACGCCTGCA
TTTACCGTCG TCGCTGAGCG GTTGTGGAAA CCGCTCCTTT GCCGCTGCCA TAGGGGTAAA
CTCGGTGAAC TTGCTGACTT TGTCAGCAAC CCATCGTCAA TACCGCCCAT ATTGAGCCAC
GAGGCCGACG CTTATCGGTG CGAAGCTGAT GAAAAAGCCG ATAAGGTCAC GCACCAGAGA
CAGGGAGAAT AA
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| Protein sequence | MFTLVQSNHM ERLAKRLADE LNQASGNVLA TEQILVQSPG MATWLRLEIA AHNGIAAALS
FPLPSNFIWS LCYALLPGVP KENAFTKDAM TWKLMALLPR LIEKPHFEPL RDYLSSDSPL
KLFQLASRVA DIFDQYLVYR PDWIVTWELG ENDLSPTGSP LTQGAALPDN CLWQPLLWRA
LVQYNRDELG QSHWHRANLH QALVAALSNP NTDISALPRR LFVFGISSLP PQTLEVLYAL
GSRIPVTMLS LSPCRQYWGD IVDSKLRAKL ALKYKAHKML PEHWEETLEV GNPLLAANGK
MGRELLDLVL SLPPEHFTLD DSGYETNDDS HLLGRLQNDI LDMEVAGAPL CADLARYQSN
EGKFLLDEQD NSLVLRSCHS PLREVETLHD HLLGLLSDRQ GRLSAKNIVV MLPDVAAYAP
FIDAVFASRR GEHYIPYAIA DRGAVEESPL IHGFLTLLDI NHSRFGLSEI LGLLEIPAVM
AKFKLDEEEL SRLGNWLSEA GVRWGRDAQS REKLGLPAFD KHSWAFGIRR LLLGFSLGDE
GDFYHGTLPF AGVEGQQAQC VGKLLDFIEH LDEFAARFAA ADSLTLKFAE LSRLTDTLFA
PLPEYQEELN LIRETLCDTQ KALQSSASSE SSLSDISLEV ICQTLGSKLT DARVGQRFLA
GSVNFCTLMP MRSIPFKVVC LLGMNEGIYP RVQHPVGFDL MAKTPARRGD RSRRLDDRYL
FLEALLSARE QLYISFIGRS ERDDSERLPS MLVSELLDCC ELSAYVSQGK LVNRLVKQQP
LQPFDHRLYL TNQDITASFA AQWCPQETRP PKPFIDAVLD EVDEDEHKVL ELASLIRFYR
DPARFFCQRR LRLDLSHRLD ALDDSEPFDV DALGRYQLQD KMLNAALEAD EIRQQLAVDT
LCDRLAGAGV LPMAPFDKLL FASYQRDLAP ILDRCRFIMG ETEGQSLRIS LVLNQGHKLV
GTIDKVFAKG LLVARPGTAK AKDVLALYLR HLCLCASGYR QSSFLLDVGN FHAFLPLTPD
NALTSLEDFI SHYFESVRTP SPLIPALAMT YIEALAEGAS EEESLAELST KWDDGNGMGE
IAEPHNERLF EFPASFATPA FTVVAERLWK PLLCRCHRGK LGELADFVSN PSSIPPILSH
EADAYRCEAD EKADKVTHQR QGE
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