Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1894 |
Symbol | |
ID | 4604144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 2309910 |
End bp | 2311472 |
Gene Length | 1563 bp |
Protein Length | 520 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639781271 |
Product | hypothetical protein |
Protein accession | YP_927769 |
Protein GI | 119775029 |
COG category | [S] Function unknown |
COG ID | [COG1322] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGCCGC TTGACCTTTT TTCTCTTCCC CAATGGATAG CCATTTCCGC CCTTTGTTTT CTTTTTCTGA TGATCGGGGC TCTCATTAAT CAGATCCTCA CCCGTAAACG CTGGGAAAGC CTTGATGCAC TGCGTATTGA GCAGCATCAA GCCGCCATCT GCGCCCTTGA ATCACAATTG GACGAGCACA AAAACCAACT CGACGATAAA GAAGACCGAC TGAGCTTTTT TCAAAACCGC ATTGAGGAAG TCAGCCAACG TTACGGTGAA GCCAAGGCTG AGGCACAGCG GTTACCCGAA CTTGAGCAAA AGCTGGCCGA CACCCATAGA CAATTGATGG AAGCCCGGCT GGAAACCGCC AAGGCCATCG CCATGCAACA GAGCATCAGT GCCAAGTTTG ACGCCGAGCG GCAGGCGTTC GAAGAAAAGC TGGCCCTGCT GGAATCAGCA GAAGCCCGGT TAAAATTGCA GTTTGAAAAC CTTGCAAACA AAATTTTTGA ACAGAGAGCG GAGCAGCTTA AAGGGCAGAA TTTATTGCAG CTTGATGCGG TAATCGGCCC TCTAAAACAA CAAATTGACG GTTTCAGAAA ACAAGTCAAT GAATCCTATT CAATTGAACA GGCCGAGCGC AGTAGCCTTA AACATCAGCT CGAACAACTG GCATCCCTTA ATGTGAAGAT GAGCCAGGAC GCCATCAACC TGACCAACGC CCTCAAAGGT GACAATAAAC AGCAGGGCAA CTGGGGAGAA GTCATACTGG AGCGGGTGCT CAGTGAAAGC GGCCTGCGTG AAGGTCACGA GTACCACACC CAGCAAGAAT TGAAGGCCGA GAATGGACAA AAGTTCAAAC CCGACGTGAT AGTCCACCTG CCCGGCGAAA AAGACGTGGT GATAGACGCC AAAATGTCGC TCACCGCTTA TGAGCGCTAT TTTAACGCCA GCGAGGATGC CGACAAGGCA CAGGCCCTCA AAGAGCATGT ACTGTCGGTC AGAAGCCATA TCAAGTTGCT CTCACAAAAG GATTATCAAC ACCTCCACGG CCTTAAAACC CTCGATTATG TGTTGATGTT TATTCCTGTG GAACCCGCCT TTTTATTGGC ACTTGAGCAG GAGCCGGGAC TGGTTGGCTA CGCCCTTGAA CACAATATTA TGCTTGCCAG CCCAACCAAT TTGTTGGTTG CCCTGCGCAC AATTCACAAT ATCTGGCGAT ACGAATATCA GAATCTGCAT GCACAGCACA TCGCTAAGGC CGCGGGCAAA ATCTACGACA AACTCTGTAT TTATGTGGAC GAAATGGACA AGTTAGGTCG CTCGCTGGAC ACGGCGCAGA AAAGTTTTCA ATCAGCGATG GGCAAACTCT CCACCGGCCG CGGTAATCTT ATTCGTCAAG CCCATCAAAT GCGCCAGCTT GGCGTTGAAA GCAGTAAACA GCTAGACAAG CAACTGCTTG ACAACGCCCT TGACGACAGC ATGGAAGCCG GAGAGGACGA CGATACTGTA GCCGACACTC TGGCCGTCAA TGGTTCAACG CCAGTGCCAC ATCTGACTAA CCAGAGACAG TAA
|
Protein sequence | MTPLDLFSLP QWIAISALCF LFLMIGALIN QILTRKRWES LDALRIEQHQ AAICALESQL DEHKNQLDDK EDRLSFFQNR IEEVSQRYGE AKAEAQRLPE LEQKLADTHR QLMEARLETA KAIAMQQSIS AKFDAERQAF EEKLALLESA EARLKLQFEN LANKIFEQRA EQLKGQNLLQ LDAVIGPLKQ QIDGFRKQVN ESYSIEQAER SSLKHQLEQL ASLNVKMSQD AINLTNALKG DNKQQGNWGE VILERVLSES GLREGHEYHT QQELKAENGQ KFKPDVIVHL PGEKDVVIDA KMSLTAYERY FNASEDADKA QALKEHVLSV RSHIKLLSQK DYQHLHGLKT LDYVLMFIPV EPAFLLALEQ EPGLVGYALE HNIMLASPTN LLVALRTIHN IWRYEYQNLH AQHIAKAAGK IYDKLCIYVD EMDKLGRSLD TAQKSFQSAM GKLSTGRGNL IRQAHQMRQL GVESSKQLDK QLLDNALDDS MEAGEDDDTV ADTLAVNGST PVPHLTNQRQ
|
| |