| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1893 |
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| Symbol | |
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| ID | 4604143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2308716 |
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| End bp | 2309720 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639781270 |
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| Product | putative sulfite oxidase subunit YedY |
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| Protein accession | YP_927768 |
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| Protein GI | 119775028 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2041] Sulfite oxidase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.772909 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACACGCC CATCTTGGCA ACTGTCTGAG GCCGAGGTCA CGCCCGAGCC TTTGTTCAGG
GACCGACGTG CCATCGTAAA AGCGCTGGGA TTGGGCGCCA TTGGCGCGAG CCTTCCCGGC
GCAGTGCATG GCAGTATATT TGATGTGTTT TCCTCAGCAC CCAAGCCAGT TTTTATTCAA
GCCCCCTTGT CTGCCAATAA GCCCGCTGCG TTTCAGGATT TTTCCGAGCC TCTCACTCCG
GAAAACAAGG TCATAAGTCA CAACAACTTT TACGAGTTTG GTACTGCCAA GACCGACCCG
GTTGAAAATG CCCAGTCGTT TAAAGTGAAC CCCTGGCACC TGTCGGTAGA GGGCCTGGTA
GATACGCCAT TGCAGCTTGA TTATGATGAT TTGCTGCAAA GCTTCGCCCT TGAGGAGCGT
ATCTATCGAC TGCGCTGCGT TGAAGCCTGG TCAATGGTGG TGCCCTGGGT TGGTTTTCCA
CTGGCGGCAC TGTTAAAAAA GGCCGGTGTA AAGGCTGGGG CTACCCATGT GGCGTTTGAA
ACCCTGTACG ATCCGGCGCA AATGCCGGGA CAAAAAAATA CTTATGTGGG CGGTGGCATT
CATTATCCTT ACGTGGAAGG GCTGACCCTC GCTGAAGCCA TGAATGAGTT ATCTCTCCTG
AGCGTAGGGC TCTATGGAAA AACCCTGCCG CCCCAAAATG GGGCCCCGGT TCGTTTGGTG
GTACCCTGGA AATACGGCTT CAAGAGTATT AAATCCATTG TGAAAATTAG GGTGATGAAC
AAGCAGCCAC CTACAAGCTG GAATCAGCTA GCTCCCCACG AATATGGATT CTATGCGAAC
GTAAACCCCG ATGTGGATCA TCCCAGGTGG TCTCAGGCCT CTGAGCGCAG AATAGGTCCG
GGAGGGCTTT TTTCTGCCGA GCGTATCGCG ACACGTCCGT TCAACGGTTA CGAAGAGCAG
GTAGCGCATC TCTATAAAGA CTTGGATTTG AAAAGGTATT TTTAA
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| Protein sequence | MTRPSWQLSE AEVTPEPLFR DRRAIVKALG LGAIGASLPG AVHGSIFDVF SSAPKPVFIQ
APLSANKPAA FQDFSEPLTP ENKVISHNNF YEFGTAKTDP VENAQSFKVN PWHLSVEGLV
DTPLQLDYDD LLQSFALEER IYRLRCVEAW SMVVPWVGFP LAALLKKAGV KAGATHVAFE
TLYDPAQMPG QKNTYVGGGI HYPYVEGLTL AEAMNELSLL SVGLYGKTLP PQNGAPVRLV
VPWKYGFKSI KSIVKIRVMN KQPPTSWNQL APHEYGFYAN VNPDVDHPRW SQASERRIGP
GGLFSAERIA TRPFNGYEEQ VAHLYKDLDL KRYF
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