| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1887 |
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| Symbol | |
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| ID | 4604137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2302542 |
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| End bp | 2304356 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639781264 |
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| Product | AsmA protein |
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| Protein accession | YP_927762 |
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| Protein GI | 119775022 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.510755 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTGA TCAAATGGAT CTTCGCTGGC ATCGCTGCGA TTGCCGTCTT AGTGGTGCTG
TACATTACTC TCATATTTGA CCCCAATGAT TTTAAACCCA TGCTGGTGGA TGCTGTAAAA
GAGCAGACAG GTCGCGACCT TGTTATTGAA GAGCCGCTGT CATGGCAATT TTTCCCCTCT
ATTGGCATTC GTCTGGCGGG GGTGAGCCTG TCTAACCCCG AAGGCTTTAA AGAAGCCCAT
ATGATGGCGG TTAAAGAGGT GGTTGCCGAG GTTAAACTTC TGCCCCTGCT CAGCCGGGAT
GTACAAATCG ATCAGTTGCG TCTCGACGGC GCCAAGTTAA CCCTGGTCAC CACCAAGCAG
GGCAAATCAA GCCTCGATGG CCTGACTGGC AACACCACAT CTGCTGATAA ACCGGCAGAC
GTAAAGCAGG GCCCGGGGCT CAATGCCATC AGCATTGGCG GAATAAACAT CAGTGATACC
AGCATTACCC TAATTGATGA AGCCGCTGGC AGCAGCCAAA CCTTTACGCT GTCGTCATTA
ACACTGGGTG AGTTTACCCC TGGAAAAGCC GCACCACTGG CATTTGCGTT CGGCGCTGAT
TTGCCTGATA TGAAGGTAAA AGGTGAGGGT GAGGCGACAC TGACGGTGAG TGAAGCTTTT
AATGCCTTGT CACTTGTCGG ATTGAATTTG GAGGTTAATG CTCAGGGCAA CTCGCTGCCA
AAGGGCGCTG TAACAGTTGA GTTTGCCGGT GGAGCCGATG TGGCATTGGA AGCCAAAACC
GCCAAACTGA CCGTGGATAA ACTAACCCTG ATGGACATTG AAGGCAAAGG CGCCATTGCA
GCAAACTATG GCAAAAAAGT GCCTTTTGTG GATGTTGAGC TGGCCTTTGG TGCAATCGAT
GTCGACGCCA TTCTCGGTAC CGAAAAGTCG CAAACCAAGG CAGATTCGAC CGCACCCGAT
ACCGCGCAGA AAGAGCCGGA CTTGTCCGGG ATGAAGGCCG TTGATGCCAA ACTCAAATTG
GACATTGCCG CCGTGAAAGT GGCAGGTCTG TCTACTGCTG ATTGGGCACT CAGAGCCAAT
CTTGCCGGGG GCGTGCTTAA AGTCGATGAA CTCAAAGCAT CCCTGTATGG CGGCAAAGTG
GGGGCGAGCG CCACCCTCGA TGGCCGCAAA GTACCGGCGG TCTATAGCTT TAATAAAGCC
ATCACTGGCG TACAGATATT GCCACTACTG AAAGATGCTG CCGAAGTTGA TTTGCTTGCA
GGTACGGCCA ACTTTGACAT TCAGGGTAAG GGCGCAGGTT TGCTGGCAGA CAACATCAAG
CGCAACCTCA ATGCCAATGG TAAGTTTGAA GTGGCCGATG GTGCGCTCTA TGGTGTGAAC
GTGCCACAAA TGATCCGTGA TGCACAGGCC AAGCTCAAAG GTGATTTGAA TGCGGCCGCC
GGTGGCGAAG AGAAGAAGAC TGATTTCTCA AGCCTTACAG GTTCTTTGAA TATCGCCGCA
GGAAAAGCCA ATAATCCTGA TTTGTTGATG CTCTCACCGC TACTGCGAAT TTCCGGGCAG
GGCGGCGCAG ATCTTATGGC CGAAACCCTC GACTATAAGC TCGCCACCAA GGTGGTTGGC
TCACTGGAAG GACAGGGCGG TGATACGGCG TTGGCAGGCA TAGAAATTCC GCTCGCTATT
ACCGGCAGCT TTACCGAGCC CAAATTTGCC CTGGATACCG AGGCTCTGCT CAAAGGCCAA
CTGAAGGGCG AGACTGATAA ACTCAAAGAT AAGTTGAAAG ATTCCCTGTT CAAAAAGTTG
GGAGGTAATC AATGA
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| Protein sequence | MKLIKWIFAG IAAIAVLVVL YITLIFDPND FKPMLVDAVK EQTGRDLVIE EPLSWQFFPS
IGIRLAGVSL SNPEGFKEAH MMAVKEVVAE VKLLPLLSRD VQIDQLRLDG AKLTLVTTKQ
GKSSLDGLTG NTTSADKPAD VKQGPGLNAI SIGGINISDT SITLIDEAAG SSQTFTLSSL
TLGEFTPGKA APLAFAFGAD LPDMKVKGEG EATLTVSEAF NALSLVGLNL EVNAQGNSLP
KGAVTVEFAG GADVALEAKT AKLTVDKLTL MDIEGKGAIA ANYGKKVPFV DVELAFGAID
VDAILGTEKS QTKADSTAPD TAQKEPDLSG MKAVDAKLKL DIAAVKVAGL STADWALRAN
LAGGVLKVDE LKASLYGGKV GASATLDGRK VPAVYSFNKA ITGVQILPLL KDAAEVDLLA
GTANFDIQGK GAGLLADNIK RNLNANGKFE VADGALYGVN VPQMIRDAQA KLKGDLNAAA
GGEEKKTDFS SLTGSLNIAA GKANNPDLLM LSPLLRISGQ GGADLMAETL DYKLATKVVG
SLEGQGGDTA LAGIEIPLAI TGSFTEPKFA LDTEALLKGQ LKGETDKLKD KLKDSLFKKL
GGNQ
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