| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1880 |
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| Symbol | |
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| ID | 4604130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2296021 |
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| End bp | 2296749 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639781257 |
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| Product | DNA-directed DNA polymerase |
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| Protein accession | YP_927755 |
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| Protein GI | 119775015 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0115193 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATCA TTTCAAATGC CGAAAGGCAG ATCATCCTCG ATACCGAAAC CACAGGTATG
AATCAGGGCG CCGGTGCGGT GTACCTCGGG CACAGGATCA TTGAAATTGG CTGTGTGGAA
GTGGTAAACC GTCGCTTAAC CGGACGCACC TTCCATCAAT ATATCAATCC CGGCCAGGCG
ATTGATGAAG AAGCCATTGC GGTACACGGC ATTACCAACG ACAGGGTTGC CGGTGAACCC
CGATTCCATG AGATTGTTGG CGGATTTCTG GATTTTATCC GCGGGGCCGA GTTGGTGGCG
CATAATGCGT CGTTCGATAT GAGCTTTATC AACCACGAGT TTTCGATGTT GGTGCCTCAG
GGACCCAAGG TTGAAGACAT CTGCACCGTG CTTGACTCCC TTGCCATTGC CAAGTTTTTG
CACCCCGGGC AGAAAAACAA CCTCGATGCG CTCTGTAAAC GATATGGCAT AGACAATACC
CGCCGTACTT ACCACGGCGC TTTGCTCGAC GCCGAGATCC TGGCCGATGT CTATCTGGTG
ATGACAGGCG GCCAGACCAA ATTTAATTTG CACGCCGATG AAGGCTCTCA GGAGCAGGGC
GGGATCATTC GCCTGGATTC CAATCGCCCA AGCCTTAAAG TTGTCCGAGC CACGGCCGAT
GAACTGGGTA ATCATGAAAA ACGGCTTGAT TTGGTAGGCA AATCGGGCAA ATGCCTCTGG
CGGGGATAA
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| Protein sequence | MNIISNAERQ IILDTETTGM NQGAGAVYLG HRIIEIGCVE VVNRRLTGRT FHQYINPGQA
IDEEAIAVHG ITNDRVAGEP RFHEIVGGFL DFIRGAELVA HNASFDMSFI NHEFSMLVPQ
GPKVEDICTV LDSLAIAKFL HPGQKNNLDA LCKRYGIDNT RRTYHGALLD AEILADVYLV
MTGGQTKFNL HADEGSQEQG GIIRLDSNRP SLKVVRATAD ELGNHEKRLD LVGKSGKCLW
RG
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