| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1879 |
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| Symbol | |
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| ID | 4605979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2294720 |
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| End bp | 2296039 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639781256 |
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| Product | hypothetical protein |
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| Protein accession | YP_927754 |
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| Protein GI | 119775014 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03503] conserved hypothetical protein TIGR03503 |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00596429 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCTGG CGGGGATAAT CACCTTGTTG AAAGCCTTGC AACTGTTATT GTTGTTTGCG
CTGGTCTGTT TGCAGGCCAT GCCCGTGCTT GCTGGCGTCG TGCCCAAAGA GCAGGCGCGG
GAGCTTAAAA ATCGTTTTCG CATCGACCAT ATGGTGGAGA GCCTGACGCT GGTTATTCAG
CGTGACTACG GCAGTGCACC CGTGGTGGTC GTGTTGCCGG ATGGCAGCAA ATGGTATGCC
TCCAGACACC CAGAAACGGT TAAATGGACC GATGGGGTGA CGGGTGACAT CATTTCCATC
GAAAATCCCC AGCCCGGTCC CTGGCAGTTG GTAGGCAAGG TGTCCAAGGG CTCAACGCTG
CACATGTTAA GTAAGCTCTC GGTGGAAATA GACCCTTTGC CCCAGCCCTT GTTTCAGGGA
GAGCGCATCA AAATTACCGC CAGACTCATG GGAGATGAAC AGCGGCTCAG AATGCCGGGT
TTGGACTATC TGGTAGAGTG GGTGGCCCGC TTTGTGAGCG ATCATCAGCC AGGGGATGAA
AACTTTGCGG CCGGTACAGT GACCGTGGGC AGCTATAAAG ATGACGGTGA AGGCCTGGAT
GAACGACCCG ATGACGGCAT CTTTACCGGC ACCATTAACC TGAATCAACC CTGGGGCCAT
TACAAATTTA CCGTTCAGGC CCGCAACAAT GTATTCGACC GTGAAGAAGA GATGGCGGTT
ATTCTCTCCA GGCATCCCAT CAATCTTCAG CTTATTGAGC CGGACGACCC GCTCACATCA
CCTTATCGTA TGAGCGTCAG CATCGATGCT GAAGCATTGC AACTGGCAGA AACTCACCTG
GAACTGGAAT TGGTTGGCCC GGCAGGACTC CAGTTACCAA TCACCTTTTC CGGACTGACA
GAAGGGCAGA ATGAATTTGT GCTTCCTGAA GTCCATGAGT TCGGTAGTTA CCGCATCAAA
GGGGAAGCGT TCTCGACCAC TGTGACCGGC CGCGAAATTG TCCTGAGTTT GCCGGAAAAA
TTTTTCAACC TTATCGAACC ACCTGCGCCA CCGCCCAGTC CGGAGGAGAT AGCAGAGCGC
GAAGCAGCAA TTGCAGCAGC TGAAGAGGCC AAAGCCAAAG AAAGTGCCAT GATGGTCCTC
ATTGGTGTTA ATCTGGTGTT GCTGCTGCTT GGCATAGTTG CCATTATCTT CTGGCGTAAG
CGTCAGGCCT TGAAAAAGGC CCTTGAAGCC GCGGCTCTGG ATGCCGCCAA TCAGGACAAA
TCATCGAAAT CCATGAAAGA AACTCTGGAT GATATCGACC TGACGTTGCC TGATGATTAG
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| Protein sequence | MPLAGIITLL KALQLLLLFA LVCLQAMPVL AGVVPKEQAR ELKNRFRIDH MVESLTLVIQ
RDYGSAPVVV VLPDGSKWYA SRHPETVKWT DGVTGDIISI ENPQPGPWQL VGKVSKGSTL
HMLSKLSVEI DPLPQPLFQG ERIKITARLM GDEQRLRMPG LDYLVEWVAR FVSDHQPGDE
NFAAGTVTVG SYKDDGEGLD ERPDDGIFTG TINLNQPWGH YKFTVQARNN VFDREEEMAV
ILSRHPINLQ LIEPDDPLTS PYRMSVSIDA EALQLAETHL ELELVGPAGL QLPITFSGLT
EGQNEFVLPE VHEFGSYRIK GEAFSTTVTG REIVLSLPEK FFNLIEPPAP PPSPEEIAER
EAAIAAAEEA KAKESAMMVL IGVNLVLLLL GIVAIIFWRK RQALKKALEA AALDAANQDK
SSKSMKETLD DIDLTLPDD
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